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Minor typo and docstring changes

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1 parent e8adae5 commit 2b073bddf7279abe6743b54801644e932bd3344d @peterjc peterjc committed Dec 3, 2012
Showing with 4 additions and 6 deletions.
  1. +4 −6 Bio/SearchIO/FastaIO.py
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@@ -1,4 +1,4 @@
-# Adapted from Bio.AlignIO.FastIO copyright 2008-2011 by Peter Cock.
+# Adapted from Bio.AlignIO.FastaIO copyright 2008-2011 by Peter Cock.
# Copyright 2012 by Wibowo Arindrarto.
# All rights reserved.
# This code is part of the Biopython distribution and governed by its
@@ -30,7 +30,7 @@
Bio.SearchIO.FastaIO supports parsing and indexing FASTA outputs triggered by
the -m 10 flag. Other formats that mimic other programs (e.g. the BLAST tabular
-format using the -m 8 flag) may be parseable but using SearchIO's other parser
+format using the -m 8 flag) may be parseable but using SearchIO's other parsers
(in this case, using the 'blast-tab' parser).
@@ -241,8 +241,7 @@ def _extract_alignment(parsed_hsp):
class FastaM10Parser(object):
-
- """Parser for the Fasta -m10 output."""
+ """Parser for Bill Pearson's FASTA suite's -m 10 output."""
def __init__(self, handle, __parse_hit_table=False):
self.handle = UndoHandle(handle)
@@ -486,8 +485,7 @@ def _parse_hit(self, query_id):
class FastaM10Indexer(SearchIndexer):
-
- """Indexer class for FASTA m10 output."""
+ """Indexer class for Bill Pearson's FASTA suite's -m 10 output."""
_parser = FastaM10Parser

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