From ab9e064af4cf48504adb0ab8835b1a0a5f541ff5 Mon Sep 17 00:00:00 2001 From: Emmanuel NOUTAHI Date: Thu, 21 May 2015 12:30:47 -0400 Subject: [PATCH] Fix error while building a codon alignment, The default codon table is always used --- Bio/codonalign/__init__.py | 1 + 1 file changed, 1 insertion(+) diff --git a/Bio/codonalign/__init__.py b/Bio/codonalign/__init__.py index 781cef455cc..4db17d4cbd3 100644 --- a/Bio/codonalign/__init__.py +++ b/Bio/codonalign/__init__.py @@ -179,6 +179,7 @@ def build(pro_align, nucl_seqs, corr_dict=None, gap_char='-', unknown='X', codon_rec = _get_codon_rec(pair[0], pair[1], corr_span, alphabet=alphabet, complete_protein=False, + codon_table=codon_table, max_score=max_score) codon_aln.append(codon_rec) if corr_span[1] == 2: