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Added -showxml and -showtree options to Prank wrapper

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etal committed Aug 18, 2013
1 parent cf19688 commit cc234b75e6e82cf9f51e3384a4fbfa1e888a3af1
Showing with 4 additions and 0 deletions.
  1. +4 −0 Bio/Align/Applications/
@@ -85,6 +85,10 @@ def __init__(self, cmd="prank", **kwargs):
"Do not output XML files"),
_Switch(["-notree", "notree"],
"Do not output dnd tree files"),
+ _Switch(["-showxml", "showxml"],
+ "Output XML files"),
+ _Switch(["-showtree", "showtree"],
+ "Output dnd tree files"),
_Switch(["-shortnames", "shortnames"],
"Truncate names at first space"),
_Switch(["-quiet", "quiet"],

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