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Only testing for qbalst(program='blastn') and qblast(program='blastp'…
…) now
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idoerg committed Feb 18, 2005
1 parent d4b16d3 commit f5859af
Showing 1 changed file with 23 additions and 16 deletions.
39 changes: 23 additions & 16 deletions Tests/test_NCBIWWW.py
Expand Up @@ -7,25 +7,32 @@
from Bio import ParserSupport
from Bio.Blast import NCBIWWW

all_tests = [
'bt019', 'bt020', 'bt021', 'bt022', 'bt023',
'bt024', 'bt025', 'bt026', 'bt027', 'bt028',
'bt029', 'bt030', 'bt031', 'bt032', 'bt033',
'bt034', 'bt035', 'bt036', 'bt037', 'bt038',
'bt061', 'bt064', 'bt066', 'bt069', 'bt070'
]
# Biopython 1.40
# blast is deprecated now, and qblast only works for program=blastp or program=blastn
# Therefore, we only have two tests.
# all_tests = [
# 'bt019', 'bt020', 'bt021', 'bt022', 'bt023',
# 'bt024', 'bt025', 'bt026', 'bt027', 'bt028',
# 'bt029', 'bt030', 'bt031', 'bt032', 'bt033',
# 'bt034', 'bt035', 'bt036', 'bt037', 'bt038',
# 'bt061', 'bt064', 'bt066', 'bt069', 'bt070'
# ]

all_tests = ['bt100', 'bt101']

# In order to keep the output file sizes reasonable, only generate
# a bunch of output for a few of the tests.
detailed_tests = [
'bt019', # 2.0.10 blastp
'bt023', # 2.0.10 blastp master-slave
'bt026', # 2.0.10 blastn
'bt028', # 2.0.10 blastx
'bt030', # 2.0.10 tblastn
'bt032', # 2.0.10 tblastx
]

#detailed_tests = [
# 'bt019', # 2.0.10 blastp
# 'bt023', # 2.0.10 blastp master-slave
# 'bt026', # 2.0.10 blastn
# 'bt028', # 2.0.10 blastx
# 'bt030', # 2.0.10 tblastn
# 'bt032', # 2.0.10 tblastx
# ]

detailed_tests = ['bt100', # blastn
'bt101'] # blastp
### _Scanner

print "Running tests on _Scanner"
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