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Commits on Mar 3, 2001
  1. updated __init__.__all__ variables

    jchang committed Mar 3, 2001
  2. changed AUTHORS to CONTRIB

    jchang committed Mar 3, 2001
  3. updated version number for 1.00a1

    jchang committed Mar 3, 2001
  4. added changes for 1.00a1

    jchang committed Mar 3, 2001
  5. updated README for 1.00a1 release

    jchang committed Mar 3, 2001
  6. added new description_header event

    update to regression test
    jchang committed Mar 3, 2001
Commits on Mar 2, 2001
Commits on Feb 28, 2001
  1. *** empty log message ***

    katel committed Feb 28, 2001
Commits on Feb 26, 2001
  1. Modified to be much more flexible in the characters allowed in clusta…

    …lw titles, and updated to use new Martel.AnyEol()
    chapmanb committed Feb 26, 2001
Commits on Feb 25, 2001
  1. Added MultiProc code from Jeff to the setup file.

    chapmanb committed Feb 25, 2001
  2. *** empty log message ***

    katel committed Feb 25, 2001
Commits on Feb 24, 2001
  1. fixed memory leak

    I thought that PySeq_GetItem returned a borrowed reference rather than
    a new reference and wasn't Py_DECREF'ing them.  These references are
    now properly Py_DECREF'd.
    jchang committed Feb 24, 2001
Commits on Feb 23, 2001
Commits on Feb 21, 2001
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    katel committed Feb 21, 2001
Commits on Feb 20, 2001
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    katel committed Feb 20, 2001
Commits on Feb 18, 2001
  1. /tmp/cvsPoPlAl

    thomas committed Feb 18, 2001
Commits on Feb 15, 2001
  1. Fixes for non-fuzzy handling I found after writing tests. Mmmm... tes…

    …ts are good
    chapmanb committed Feb 15, 2001
  2. Added test for Location handling

    chapmanb committed Feb 15, 2001
  3. Updated nonfuzzy return positions so that they would conincide with w…

    …hat Bioperl does -- minimum to maximum span of a fuzzy location
    chapmanb committed Feb 15, 2001
  4. recoded nextorf, added nostart option

    thomas committed Feb 15, 2001
  5. Added a example for indexing a swiss+trembl non-reduntant database fo…

    …r fast
    
    lookup and retrieval (both for commandline and as module)
    thomas committed Feb 15, 2001
  6. *** empty log message ***

    katel committed Feb 15, 2001
Commits on Feb 11, 2001
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    katel committed Feb 11, 2001
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    katel committed Feb 11, 2001
Commits on Feb 8, 2001
  1. parsers are now derived from AbstractParser

    jchang committed Feb 8, 2001
  2. bug fix in download_many

    did not initialize idnum variable, which was causing problems
    error messages are now more informative
    jchang committed Feb 8, 2001
  3. added AbstractParser class as a base class for parsers

    contains parse_str as a convenience function, so you don't have
    to wrap strings into a handle to parse something
    jchang committed Feb 8, 2001
  4. added explanation note at top of file

    added Elmer Bernstam for QA on PubMed code
    jchang committed Feb 8, 2001
Commits on Feb 6, 2001
  1. fixed minor typo in biopython url

    jchang committed Feb 6, 2001
  2. *** empty log message ***

    katel committed Feb 6, 2001
Commits on Feb 3, 2001
  1. Small fix in array initialzer for MutableSeq

    chapmanb committed Feb 3, 2001