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Commits on Apr 2, 2011
Commits on Apr 1, 2011
  1. Add news about pip for 1.57

    chapmanb committed Apr 1, 2011
  2. Fixed a typo

    peterjc committed Apr 1, 2011
  3. NCBI BLAST 2.2.25+ added -best_hit_overhang, -best_hit_score_edge and…

    … -culling_limit to rpsblast
    peterjc committed Apr 1, 2011
  4. Replace SRA example with a (smaller) single end 454 example from the …

    …ENA (broken URL spotted by Peter Thorpe)
    peterjc committed Apr 1, 2011
Commits on Mar 31, 2011
Commits on Mar 30, 2011
Commits on Mar 29, 2011
Commits on Mar 28, 2011
Commits on Mar 27, 2011
  1. Phylo: when using functions as a target spec, also silence TypeError.

    Spotted by Peter for Py3 compat, but this is useful in Py2 too.
    etal committed Mar 27, 2011
Commits on Mar 26, 2011
  1. Phylo: allow target specifications in collapse_all, + test

    The example in the docstring had a bug; this is better.
    etal committed Mar 26, 2011
Commits on Mar 22, 2011
Commits on Mar 17, 2011
Commits on Mar 13, 2011
Commits on Mar 12, 2011
  1. Remove Tutorial doctest names...

    peterjc committed Mar 12, 2011
Commits on Mar 10, 2011
Commits on Mar 8, 2011
  1. Updated the documentation. The local DTD directory should be read bef…

    …ore the global DTD directory, so that users can put newer versions of a DTD file in the local DTD directory if the one in the global DTD directory becomes outdated.
    mdehoon committed Mar 8, 2011
  2. Updated some DTDs

    mdehoon committed Mar 8, 2011
  3. Use the local DTD directory if available, so that users can put newer…

    … versions of a DTD there
    mdehoon committed Mar 8, 2011