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Abi Add support for parsing fsa files Mar 1, 2017
Ace Added a sample 'new' (post 1998) ACE file from the CONSED documentati… Jun 17, 2008
Affy Parser for Affy CEL file version 4 Dec 9, 2016
BWA Command line wrapper for BWA Apr 11, 2013
BioSQL fix issue #615 Aug 29, 2016
Blast Test case for row of dashes in plain text BLAST Jun 4, 2015
Blat Add test cases for blat-psl with protein queries and negative strand … May 18, 2017
CDAO Converting a tree into a librdf model and then serializing is slow, r… Feb 26, 2013
Cellosaurus Added ExPASy Cellosaurus parser with tests Nov 29, 2016
Clustalw Fixing Bio.Clustalw when parsing non-standard header lines, and addin… Aug 7, 2008
Cluster cyano.txt sample file for Bio.Cluster documentation. May 26, 2017
CodonUsage Removing Mac OS hidden meta data file Mar 20, 2009
Compass Added Compass parsing code contributed by James Casbon. May 5, 2004
EMBL New test case, EMBL file missing seq coords Aug 22, 2017
Emboss Test case where eprimer3 reports oligo without sequence Jan 31, 2013
Entrez Make sure all Entrez tests pass Dec 23, 2013
Enzymes Updating these files with the latest version from ExPASy. Mar 25, 2009
Exonerate Update exonerate parser to handle dna2protein model Mar 20, 2014
ExtendedPhylip Update tests for extended phylip format Jun 18, 2011
FSSP ---------------------------------------------------------------------- Jun 7, 2001
Fasta Implement two-line-per-record FASTA parser Dec 28, 2017
GFF Support files for test_GFF Dec 3, 2002
GenBank Remove overlooked .cvsignore files Oct 20, 2017
Geo Updating the input files Tests/geo/soft_ex_*.txt; adding soft_ex_affy… Jan 21, 2008
Graphics Remove overlooked .cvsignore files Oct 20, 2017
Hmmer Adding tests to the issue fix #1126 Apr 9, 2017
IntelliGenetics TAT_mase-nuc.txt is an unused identical copy of TAT_mase_nuc.txt (whi… Jul 4, 2008
KEGG KEGG sample data update and small parser fix Aug 1, 2017
MAF Stored MAF file path relative to index. Mar 19, 2017
Mauve Correct and update to fully pass test suite. Apr 7, 2017
Medline PubMed file with multi-line MESH terms (MH lines). Nov 13, 2014
MetaTool Remove unused files. Jul 16, 2008
Motif Updating motif export Jan 15, 2013
NBRF Fix NBRF/PIR parsing so that is accepts files produced by Clustalw --… Mar 2, 2004
NeXML Adding basic unit tests for NeXML parser using example files from nex… Feb 15, 2013
NeuralNetwork Remove overlooked .cvsignore files Oct 20, 2017
Nexus Added STANDARD datatype support to Nexus parser Oct 27, 2015
PAML pep8 whitespace to make stricter flake8 tool happy Feb 8, 2017
PDB mmCIF writer for Bio.PDB Nov 1, 2017
Phd Adding 454 and Solexa derived PHD files from the Consed author David … Jul 2, 2009
Phylip Added sequential Phylip test cases and updated test_AlignIO.py accord… Dec 8, 2011
PhyloXML Phylo: make str(Tree) work with funky unicode chars on Py2/3 Dec 8, 2014
PopGen parse error tests and removal of old test files May 24, 2017
Prosite Adding part of the prosite.doc file, which is used in the Prodoc tests. Mar 16, 2009
Quality Testing indexing FASTQ file with zero length record (issue #269) Dec 12, 2013
Rebase *** empty log message *** Sep 7, 2000
Registry updated dbdefs definitions Sep 22, 2002
Roche Fixes an issue with how mode is detected from input streams for SFF f… Dec 10, 2014
SCOP Cleaning up the SCOP tests Jan 25, 2010
Saf *** empty log message *** May 14, 2002
SamBam Fix tests for samtools 1.x support Oct 7, 2015
SeqXML Forgot to add SeqXML file from Thomas Jul 14, 2011
Stockholm Add sequence to funny.sth; update tests Jan 30, 2012
SubsMat 15 Nov 00 Brad Nov 15, 2000
SwissProt Handle SwissProt UnknownPosition with null BioSQL location (#1169) Apr 19, 2017
TreeConstruction Tests: remove now-superfluous 1.0 branch lengths from TreeConstructio… Jul 9, 2014
UniGene Updating the UniGene parser to be consistent with current UniGene files. Apr 24, 2009
UniProt move UniProt.GOA selftest to doctest. Oct 10, 2016
Wise Adding Bio.Wise to the distribution Jan 15, 2004
codonalign change codonalign test folder name Nov 10, 2014
motifs sample file and tests for meme rna parsing Oct 24, 2017
output convert test_AlignIO_FastaIO.py to unittest, remove self-test Feb 13, 2018
phenotype Phenotype: smaller test files Jun 3, 2016
.coveragerc Adding coverage configuration file. Apr 4, 2017
.flake8 There was no clean_up() function; flake8 F821 Jan 29, 2018
biosql.ini.appveyor Tests do not require postgresql CREATE DATABASE permissions Oct 27, 2017
biosql.ini.sample Tests do not require postgresql CREATE DATABASE permissions Oct 27, 2017
common_BioSQL.py Tests do not require postgresql CREATE DATABASE permissions Oct 27, 2017
common_BioSQL_online.py Minor pydocstyle cleanup under Tests/ May 7, 2017
requires_internet.py Changed exceptions to be py3k compatible Aug 29, 2013
requires_wise.py PEP8 on misc test files Nov 10, 2014
run_tests.py PEP8 and PEP257 for Alphabet module Dec 27, 2017
search_tests_common.py Fix RST validation in Tests/ docstrings Jun 15, 2017
seq_tests_common.py Minor pydocstyle cleanup under Tests/ May 7, 2017
test_Ace.py PEP8 white space in Tests Jan 4, 2015
test_Affy.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_AlignIO.py Show .column_annotations in AlignIO test Aug 4, 2017
test_AlignIO_ClustalIO.py Enable flake8 E101 for Tests; tweak noqa lines Apr 20, 2017
test_AlignIO_EmbossIO.py Enable flake8 E101 for Tests; tweak noqa lines Apr 20, 2017
test_AlignIO_FastaIO.py convert test_AlignIO_FastaIO.py to unittest, remove self-test Feb 13, 2018
test_AlignIO_MauveIO.py Correct and update to fully pass test suite. Apr 7, 2017
test_AlignIO_PhylipIO.py Move self-tests to Tests/test_AlignIO_PhylipIO.py + PEP8 Oct 28, 2014
test_AlignIO_convert.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_AlignInfo.py Add pseudo count support for information content computation (minor e… Sep 28, 2016
test_Application.py Tests: Fix D107 Missing docstring in __init__ Oct 11, 2017
test_BWA_tool.py Fix BWA tests for stdout/stderr change Nov 8, 2017
test_BioSQL_MySQLdb.py Tests do not require postgresql CREATE DATABASE permissions Oct 27, 2017
test_BioSQL_MySQLdb_online.py Tests do not require postgresql CREATE DATABASE permissions Oct 27, 2017
test_BioSQL_mysql_connector.py Tests do not require postgresql CREATE DATABASE permissions Oct 27, 2017
test_BioSQL_mysql_connector_online.py Tests do not require postgresql CREATE DATABASE permissions Oct 27, 2017
test_BioSQL_psycopg2.py Tests do not require postgresql CREATE DATABASE permissions Oct 27, 2017
test_BioSQL_psycopg2_online.py Mark BioSQL test import * with noqa for flake8 Feb 10, 2017
test_BioSQL_sqlite3.py Tests do not require postgresql CREATE DATABASE permissions Oct 27, 2017
test_BioSQL_sqlite3_online.py Mark BioSQL test import * with noqa for flake8 Feb 10, 2017
test_CAPS.py Fix remaining pep8 E124 failures under Tests/ Jun 15, 2016
test_CelFile.py Fix D212 docstring style in Tests May 8, 2017
test_Chi2.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_ClustalOmega_tool.py Replace assertTrue with assertIn/assertNotIn when suitable Dec 9, 2016
test_Clustalw_tool.py Replace assertTrue with assertIn/assertNotIn when suitable Dec 9, 2016
test_Cluster.py PEP8 whitespace Aug 21, 2017
test_CodonTable.py Add NCBI genetic code 26 Pachysolen tannophilus Nuclear Code Jun 22, 2016
test_CodonUsage.py Add: from __future__ import print_statement Sep 9, 2013
test_ColorSpiral.py Docstring tweaks for Tests/ May 4, 2017
test_Compass.py D401 (and other PEP257 and PEP8 issues) for Compass.py Dec 27, 2017
test_Consensus.py Avoid writing output files under Tests/ directory. Nov 29, 2016
test_Crystal.py Replace assertTrue with assertIn/assertNotIn when suitable Dec 9, 2016
test_DSSP_tool.py Update DSSP tests to check DSSP version before running mmCIF tests (#… May 2, 2017
test_Dialign_tool.py PEP8 white space in Tests Jan 4, 2015
test_DocSQL.py Silence deprecation warning in test_DocSQL.py Apr 5, 2017
test_EMBL_unittest.py Test EMBL file missing seq coords Aug 22, 2017
test_Emboss.py Docstring style in Tests Aug 24, 2017
test_EmbossPhylipNew.py Docstring style in Tests Aug 24, 2017
test_EmbossPrimer.py Docstring tweaks for Tests/ May 4, 2017
test_Entrez.py Replace assertTrue with assertIn/assertNotIn when suitable Dec 9, 2016
test_Entrez_online.py switch to non-UTF8 locale (the ASCII only C locale) inside test Oct 31, 2017
test_Entrez_parser.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_Enzyme.py Change Enzyme __str__ to use new-lines not spaces. Jul 21, 2017
test_ExPASy.py Update ExPASy tests for HTTPS Oct 27, 2017
test_FSSP.py PEP8 fixes, even more test files Nov 14, 2014
test_Fasttree_tool.py PEP8 white space in Tests Jan 4, 2015
test_File.py Tests.test_File.AsHandleTestCase: change assertion in test_stringio Dec 27, 2017
test_GACrossover.py Tests: Fix D107 Missing docstring in __init__ Oct 11, 2017
test_GAMutation.py Fix typo: recieve -> receive Nov 6, 2017
test_GAOrganism.py Deprecate Bio.GA for biopython 1.70 Jul 2, 2017
test_GAQueens.py Deprecate Bio.GA for biopython 1.70 Jul 2, 2017
test_GARepair.py Deprecate Bio.GA for biopython 1.70 Jul 2, 2017
test_GASelection.py Deprecate Bio.GA for biopython 1.70 Jul 2, 2017
test_GenBank.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_GenBank_unittest.py Docstring style in Tests Aug 24, 2017
test_GenomeDiagram.py Generalise short-arrow test to other sigils. Aug 25, 2017
test_GraphicsBitmaps.py Avoid naked exceptions (keyboard interupt etc) May 26, 2017
test_GraphicsChromosome.py Avoid naked exceptions (keyboard interupt etc) May 26, 2017
test_GraphicsDistribution.py Avoid naked exceptions (keyboard interupt etc) May 26, 2017
test_GraphicsGeneral.py Fix RST validation in Tests/ docstrings Jun 15, 2017
test_HMMCasino.py Fix typo: ocassionally -> occasionally Nov 6, 2017
test_HMMGeneral.py Remove unnecessary new lines and commented out print statement Jan 25, 2018
test_KDTree.py Moved self-test from Bio/KDTree/KDTree.py Aug 15, 2017
test_KEGG.py Improve test_KEGG.py coverage of KEGG Enzyme Aug 15, 2017
test_KEGG_online.py Avoid import * and other flake8 cleanup. Feb 10, 2017
test_KGML_graphics.py Tests: Fix D107 Missing docstring in __init__ Oct 11, 2017
test_KGML_graphics_online.py Remove __docformat__, we assume everything is restructuredtext Apr 19, 2017
test_KGML_nographics.py Tests: Fix D107 Missing docstring in __init__ Oct 11, 2017
test_KeyWList.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_Location.py Add: from __future__ import print_statement Sep 9, 2013
test_LogisticRegression.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_MSAProbs_tool.py Support MSAProbs testing on Windows Sep 23, 2015
test_MafIO_index.py Fix typo (thanks Bow) May 4, 2017
test_Mafft_tool.py Fix D212 docstring style in Tests May 8, 2017
test_MarkovModel.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_Medline.py Test for multi-line MESH terms in Medline (issue #286) Nov 13, 2014
test_Muscle_tool.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_NACCESS_tool.py Bio/PDB/NACCESS: Various NACCESS fixes and unit tests Nov 28, 2013
test_NCBITextParser.py Replace assertTrue with assertIn/assertNotIn when suitable Dec 9, 2016
test_NCBIXML.py Open BLAST XML files as binary (for encoding) Jul 15, 2017
test_NCBI_BLAST_tools.py Fix typo: senstive -> sensitive Nov 6, 2017
test_NCBI_qblast.py Add discoMegablast keywords to qblast + test Dec 13, 2017
test_NNExclusiveOr.py Make initial authorship of Bio.NeuralNetwork explicit Jan 29, 2018
test_NNGene.py Make initial authorship of Bio.NeuralNetwork explicit Jan 29, 2018
test_NNGeneral.py Make initial authorship of Bio.NeuralNetwork explicit Jan 29, 2018
test_NaiveBayes.py Skip NaiveBayes test if numpy.float64 is unhashable. Apr 4, 2017
test_Nexus.py Set NexusTest1.test_write_alignment tests to standard `unittest` syntax Dec 14, 2017
test_PAML_baseml.py Remove PAML tests which fail on Windows Python 3.6 Jun 22, 2017
test_PAML_codeml.py Remove PAML tests which fail on Windows Python 3.6 Jun 22, 2017
test_PAML_tools.py There was no clean_up() function; flake8 F821 Jan 29, 2018
test_PAML_yn00.py Remove PAML tests which fail on Windows Python 3.6 Jun 22, 2017
test_PDB.py Fix typo: entitity -> entity (in name of test function) Nov 6, 2017
test_PDBList.py Fix typo in test_PDBList.py and make standalone. Mar 23, 2017
test_PDB_FragmentMapper.py Convert FragmentMapper.py self-test into a unit test. May 29, 2017
test_PDB_KDTree.py More old-style classes I missed earlier; PEP whitespace Dec 3, 2015
test_PDB_MMCIF2Dict.py reserved word loop_ should be case insensitive Jan 7, 2018
test_PDB_MMCIFParser.py Rename test_MMCIF.py to test_PDB_MMCIFParser.py May 10, 2017
test_PDB_Polypetide.py Clarify copyright on test_PDB_Polypetide.py May 16, 2017
test_PDB_StructureAlignment.py Clarify copyright on test_PDB_StructureAlignment.py May 16, 2017
test_PDB_Superimposer.py Clarify copyright on test_PDB_Superimposer.py May 16, 2017
test_PDB_vectors.py Include Bio.PDB.Vector stub with deprecated warning Dec 14, 2017
test_ParserSupport.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_Pathway.py flake8: Avoid lower case l as variable name in Tests Oct 24, 2017
test_Phd.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_Phylo.py Docstring tweaks for Tests/ May 4, 2017
test_PhyloXML.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_Phylo_CDAO.py Avoid naked exceptions (keyboard interupt etc) May 26, 2017
test_Phylo_NeXML.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_Phylo_matplotlib.py Docstring tweaks for Tests/ May 4, 2017
test_Phylo_networkx.py Split Bio.Phylo tests using networkx and matplotlib Jun 17, 2016
test_PopGen_GenePop.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_PopGen_GenePop_EasyController.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_PopGen_GenePop_nodepend.py Really test GenePop FileRecord __str__ Jun 14, 2017
test_Prank_tool.py Fix D212 docstring style in Tests May 8, 2017
test_Probcons_tool.py PEP8 white space in Tests Jan 4, 2015
test_ProtParam.py PEP8 whitespace Aug 18, 2017
test_QCPSuperimposer.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_RCSBFormats.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_Restriction.py Some corrections and updates; reverted change in Restriction.py (look… Nov 16, 2017
test_SCOP_Astral.py Avoid import * and other flake8 cleanup. Feb 10, 2017
test_SCOP_Cla.py Replace assertTrue with assertIn/assertNotIn when suitable Dec 9, 2016
test_SCOP_Des.py PEP8 white space in Tests Jan 4, 2015
test_SCOP_Dom.py PEP8 white space in Tests Jan 4, 2015
test_SCOP_Hie.py PEP8 white space in Tests Jan 4, 2015
test_SCOP_Raf.py flake8: Avoid lower case l as variable name in Tests Oct 24, 2017
test_SCOP_Residues.py Avoid import * and other flake8 cleanup. Feb 10, 2017
test_SCOP_Scop.py clean import statements, pep 8 Dec 16, 2015
test_SCOP_online.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_SVDSuperimposer.py Update test_SVDSuperimposer.py Mar 28, 2017
test_SearchIO_blast_tab.py PEP8 fixes, various test files Nov 12, 2014
test_SearchIO_blast_tab_index.py Fix common PEP8 violation in unittest verbosity argument Nov 11, 2014
test_SearchIO_blast_text.py Replace assertTrue with assertIn/assertNotIn when suitable Dec 9, 2016
test_SearchIO_blast_xml.py Add and test 'use_raw_query_ids' for blast-xml parser May 22, 2017
test_SearchIO_blast_xml_index.py Docstring tweaks for Tests/ May 4, 2017
test_SearchIO_blat_psl.py Add test cases for blat-psl with protein queries and negative strand … May 18, 2017
test_SearchIO_blat_psl_index.py Fix common PEP8 violation in unittest verbosity argument Nov 11, 2014
test_SearchIO_exonerate.py Partial codons for SearchIO when parsing Exonerate Dec 12, 2016
test_SearchIO_exonerate_text_index.py Fix common PEP8 violation in unittest verbosity argument Nov 11, 2014
test_SearchIO_exonerate_vulgar_index.py Fix common PEP8 violation in unittest verbosity argument Nov 11, 2014
test_SearchIO_fasta_m10.py Fix typo: eigth -> eighth (5 times) Nov 6, 2017
test_SearchIO_fasta_m10_index.py Fix common PEP8 violation in unittest verbosity argument Nov 11, 2014
test_SearchIO_hmmer2_text.py PEP8 fixes, various test files Nov 12, 2014
test_SearchIO_hmmer2_text_index.py Enable flake8 E101 for Tests; tweak noqa lines Apr 20, 2017
test_SearchIO_hmmer3_domtab.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_SearchIO_hmmer3_domtab_index.py Fix common PEP8 violation in unittest verbosity argument Nov 11, 2014
test_SearchIO_hmmer3_tab.py PEP8 fixes, various test files Nov 12, 2014
test_SearchIO_hmmer3_tab_index.py Fix common PEP8 violation in unittest verbosity argument Nov 11, 2014
test_SearchIO_hmmer3_text.py Fix to style issues in test_SearchIO_hmmer3_text.py raised by The Tra… Apr 9, 2017
test_SearchIO_hmmer3_text_index.py Enable flake8 E101 for Tests; tweak noqa lines Apr 20, 2017
test_SearchIO_model.py Add tests for pickling and unpickling SearchIO objects Jun 9, 2017
test_SearchIO_write.py Fix blat-psl write error when query is protein and add tests May 19, 2017
test_SeqFeature.py update tests to be back-compatable to python2 Jan 31, 2018
test_SeqIO.py Implement two-line-per-record FASTA parser Dec 28, 2017
test_SeqIO_AbiIO.py Add support for parsing fsa files Mar 1, 2017
test_SeqIO_FastaIO.py Implement two-line-per-record FASTA parser Dec 28, 2017
test_SeqIO_Insdc.py Replace assertTrue with assertIn/assertNotIn when suitable Dec 9, 2016
test_SeqIO_PdbIO.py Tests: Silence a warning from Bio.SeqIO.PdbIO (closes #838) Jul 3, 2017
test_SeqIO_QualityIO.py Test parsing FASTA or SFF as FASTQ Oct 20, 2017
test_SeqIO_SeqXML.py Replace assertTrue with assertIn/assertNotIn when suitable Dec 9, 2016
test_SeqIO_convert.py Docstring tweaks for Tests/ May 4, 2017
test_SeqIO_features.py Docstring tweaks for Tests/ May 4, 2017
test_SeqIO_index.py Fix typo: identifers -> identifiers (three times) Nov 6, 2017
test_SeqIO_online.py Fix RST validation in Tests/ docstrings Jun 15, 2017
test_SeqIO_write.py Docstring tweaks for Tests/ May 4, 2017
test_SeqRecord.py Test SeqRecord translate method Aug 3, 2017
test_SeqUtils.py User zero for GC skew when no G/C present in window Apr 7, 2017
test_Seq_objs.py Seq: Pass on the gap character from UnknownSeq.ungap to Seq.ungap Jan 31, 2018
test_SffIO.py Docstring tweaks for Tests/ May 4, 2017
test_SubsMat.py Clean-up end of test_SubsMat.py Feb 8, 2017
test_SwissProt.py Docstring tweaks for Tests/ May 4, 2017
test_TCoffee_tool.py Docstring tweaks for Tests/ May 4, 2017
test_TogoWS.py Fix typo: choosen -> chosen Nov 6, 2017
test_TreeConstruction.py TreeConstruction: rename _DistanceMatrix to DistanceMatrix (closes #1304 Jul 5, 2017
test_Tutorial.py Cope with mal-formed doctests Jun 26, 2017
test_UniGene.py Fix common PEP8 violation in unittest verbosity argument Nov 11, 2014
test_Uniprot.py parse PE line, debug sequence version and propagate to record, add te… May 4, 2017
test_Wise.py changed a few assertTrue(False) -> fail() May 29, 2015
test_XXmotif_tool.py Docstring tweaks for Tests/ May 4, 2017
test_align.py Docstring tweaks for Tests/ May 4, 2017
test_bgzf.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_cellosaurus.py Added ExPASy Cellosaurus parser with tests Nov 29, 2016
test_codonalign.py add test for get_dn_ds_matrix method Apr 21, 2017
test_geo.py autopep8 E265 - Format block comments. Oct 27, 2014
test_kNN.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_lowess.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_mmtf.py Changed atom coordinates to numpy array to allow distance calculation ( Nov 20, 2017
test_mmtf_online.py Basic test of MMTF online code May 16, 2017
test_motifs.py sample file and tests for meme rna parsing Oct 24, 2017
test_motifs_online.py Extend test coverage May 31, 2016
test_pairwise2.py flake8: ingore trailing whitespace in tests Aug 4, 2017
test_phenotype.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_phenotype_fit.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_phyml_tool.py flake8 fix for Tests/test_phyml_tool.py Jul 4, 2017
test_prodoc.py use with open May 23, 2016
test_prosite1.py Fix typo: work arround -> workaround Nov 6, 2017
test_prosite2.py Fix typo: work arround -> workaround Nov 6, 2017
test_psw.py autopep8 --in-place --select E305 Tests/*.py Apr 20, 2017
test_raxml_tool.py Remove unused imports / silence flake8 F401 warnings Feb 10, 2017
test_samtools_tool.py Remove unused imports Mar 20, 2017
test_seq.py Docstring tweaks for Tests/ May 4, 2017
test_translate.py PEP8 white space in Tests Jan 4, 2015
test_trie.py Move imports to start of file (sytle change) Apr 11, 2017