Skip to content
master
Switch branches/tags
Code

Latest commit

 

Git stats

Files

Permalink
Failed to load latest commit information.
Type
Name
Latest commit message
Commit time
bin
 
 
lib
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

BioRuby Shell

Build Status

bio-shell, providing BioRuby Shell, is a command-line interface for BioRuby, an open source bioinformatics library for Ruby.

This code has historically been part of the BioRuby gem, but has been split into its own gem as part of an effort to modularize BioRuby. bio-shell and many more plugins are available at biogems.info.

Requirements

bio-shell uses the bio gem. It will automatically be installed during the installation of bio-shell in normal cases.

Installation

Add this line to your application's Gemfile:

gem 'bio-shell'

And then execute:

$ bundle

Or install it yourself as:

$ gem install bio-shell

Usage

See BioRuby documentation at https://github.com/bioruby/documentation

Development

To install this gem onto your local machine, run bundle exec rake install. To release a new version, update the version number in version.rb, and then run bundle exec rake release, which will create a git tag for the version, push git commits and tags, and push the .gem file to rubygems.org.

Contributing

Bug reports and pull requests are welcome on GitHub at https://github.com/bioruby/bioruby-shell

Cite

If you use this software, please cite one of

About

BioRuby Shell: Interactive command line interface for BioRuby

Resources

License

Stars

Watchers

Forks

Packages

No packages published

Contributors 4

  •  
  •  
  •  
  •  

Languages