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21 Open 3 Closed
21 Open 3 Closed
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Issues list

How to store feature identifiers?
#28 opened Aug 26, 2024 by wholtz
Unable to remove database using server.remove_database
#27 opened Dec 1, 2023 by mrRobot-95
1
Error loading the NCBI Taxonomy DB: "Can't call method "execute" on an undefined value"
#26 opened Feb 11, 2021 by taltman
Unmatched terms between bioentry and bioentry.accession?
#25 opened May 31, 2019 by Asutu
2
Wait time for SQLite with NCBI taxonomy.
#24 opened May 10, 2019 by grabear
9
Release BioSQL v1.0.2
#21 opened Sep 19, 2018 by peterjc
Redmine migration: BioPerl / BioSQL - InterPro Optional IDs not parsed Redmine Old tickets migrated from the OBF redmine server
#20 opened Jul 5, 2018 by cjfields
1
Redmine migration: provide SQL dumps of biosql releases with real data Redmine Old tickets migrated from the OBF redmine server
#19 opened Jul 5, 2018 by cjfields
1
Redmine migration: load_seqdatabase.pl crashes on varchar(n) Redmine Old tickets migrated from the OBF redmine server
#18 opened Jul 5, 2018 by cjfields
3
Add explicit compound primary keys to tables like taxon_name Redmine Old tickets migrated from the OBF redmine server
#17 opened Jul 5, 2018 by peterjc
Adding prefix index to seq_feature_qualifiers_value.value Redmine Old tickets migrated from the OBF redmine server
#16 opened Jul 5, 2018 by peterjc
Root nodes in the taxon table should not self reference Redmine Old tickets migrated from the OBF redmine server
#15 opened Jul 5, 2018 by peterjc
Move left/right calculation into separate script Redmine Old tickets migrated from the OBF redmine server
#14 opened Jul 5, 2018 by peterjc
How to store fuzzy locations
#13 opened May 4, 2018 by ctSkennerton
Using python to create BioSQL databases.
#12 opened Oct 26, 2017 by grabear
15
Document how to store unknown positions for features
#11 opened Apr 18, 2017 by peterjc
1
question: how to retrieve the full lineage of a species
#9 opened Feb 2, 2017 by cghiban
7
failed to update node MySQL server has gone away at load_ncbi_taxonomy.pl
#8 opened Jan 31, 2017 by hmkim
Document how to store value-less qualifiers like /pseudo
#6 opened Aug 2, 2016 by peterjc
4
Document how to store circular/linear attribute
#5 opened Jul 27, 2016 by peterjc
1
Bugzilla/RedMine issue 2839 - Remove RULES in BioSQL PostgreSQL schema Redmine Old tickets migrated from the OBF redmine server
#4 opened Jun 3, 2016 by peterjc
ProTip! Exclude everything labeled bug with -label:bug.