- R client for accessing MyGene.info annotation and query services
- Package vignette
- Install from Bioconductor by typing in your R console:
source("http://bioconductor.org/biocLite.R")
biocLite("mygene")
- Or download tarball from Bioconductor
Ref: https://bioconductor.org/developers/how-to/git/push-to-github-bioc/
-
Make sure you have the commit permission to git.bioconductor.org
Setup at https://git.bioconductor.org/BiocCredentials/login/
-
Make sure proper git remote upstream is added following the instruction above
$ git remote -v origin git@github.com:biothings/mygene.R.git (fetch) origin git@github.com:biothings/mygene.R.git (push) upstream git@git.bioconductor.org:packages/mygene.git (fetch) upstream git@git.bioconductor.org:packages/mygene.git (push)
-
Make changes and commit to origin/master
-
Merge and push changes to git.bioconductor.org
git fetch upstream git merge upstream/master
Fix any merge conflicts and push the changes to upstream
git push merge upstream master
Also follow this instruction for bugfix in a release branch: http://bioconductor.org/developers/how-to/git/bug-fix-in-release-and-devel/.
and this for bumping version after a bugfix: http://bioconductor.org/developers/how-to/version-numbering/.