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Commits on Feb 28, 2012
  1. Added a very small gff3 parser.

    committed Feb 28, 2012
Commits on Feb 16, 2012
  1. Added simple renaming loop.

    committed Feb 16, 2012
Commits on Feb 6, 2012
  1. Made script executable.

    committed Feb 6, 2012
Commits on Jan 26, 2012
  1. Fixed ypo.

    committed Jan 26, 2012
Commits on Nov 28, 2011
  1. New ad-hoc script.

    committed Nov 28, 2011
Commits on Oct 28, 2011
Commits on Oct 27, 2011
  1. Supports reformatting of output. Added usage.

    - sub-list of fields for rows
    - format string for rows
    - with or without headers
    committed Oct 27, 2011
Commits on Oct 26, 2011
  1. new BLAST parser and splitter.

    New routine to parse full BLAST result files. New script to split BLAST
    files containing many query results into many files each contaning one
    query result.
    committed Oct 26, 2011
Commits on Sep 29, 2011
  1. Fixed a stupid typo.

    (added [] around single value passed to set initialization).
    committed Sep 29, 2011
Commits on Sep 26, 2011
  1. New script.

    committed Sep 26, 2011
Commits on Sep 15, 2011
Commits on Sep 12, 2011
Commits on Sep 3, 2011
  1. Added --uniq,-u option to output only set([cross-referenced payloads]).

    Added special output filename 'stdout'.
    committed Sep 3, 2011
Commits on Aug 15, 2011
  1. New scripts.

    Csv parser (featuring make_index(columns_key, columns_payload, blacklist_set))
    Basic cross-referencer.
    committed Aug 15, 2011
Commits on May 8, 2011
  1. Seems to work OK now.

    committed May 8, 2011
  2. Added primer3tofasta, another simple extractor from blast searches.

    Moved helper read_blast into blast_parser.py.
    committed May 8, 2011
Commits on May 2, 2011
  1. hello, commit world.

    committed May 2, 2011