From f9b3131160ee8f0f6ea2495c8514f8e5a14c867b Mon Sep 17 00:00:00 2001 From: Cassia Wagner Date: Thu, 4 Mar 2021 10:53:35 -0800 Subject: [PATCH] Moves states analysis into new folder --- README.md | 3 ++- .../across-states}/across-states.nb | 0 .../across-states}/covid_tracking_current.csv | 0 .../across-states}/figures/proportion_vs_cfr.png | Bin .../across-states}/strain_to_clade.tsv | 0 .../across-states}/strain_to_state.tsv | 0 6 files changed, 2 insertions(+), 1 deletion(-) rename {across-states => additional-analyses/across-states}/across-states.nb (100%) rename {across-states => additional-analyses/across-states}/covid_tracking_current.csv (100%) rename {across-states => additional-analyses/across-states}/figures/proportion_vs_cfr.png (100%) rename {across-states => additional-analyses/across-states}/strain_to_clade.tsv (100%) rename {across-states => additional-analyses/across-states}/strain_to_state.tsv (100%) diff --git a/README.md b/README.md index 667e44c..212a63a 100644 --- a/README.md +++ b/README.md @@ -23,7 +23,8 @@ been more important in shaping the course of the pandemic than changes in the vi * `data`: Contains TSV of data used for Ct and clinical analyses cleaned of patient identifiers. * `analyses`: Contains R markdown files with code for analyses and code to produce the cleaned dataset. * `scripts`: Contains python scripts used in assembling the dataset. -* `figures`: Contains PDFs and JPGs of figures in the dataset. +* `figures`: Contains PDFs and JPGs of figures generated from the analyses. +* `additional-analyses`: Contains additional analyses not described in the manuscript. ## Citation diff --git a/across-states/across-states.nb b/additional-analyses/across-states/across-states.nb similarity index 100% rename from across-states/across-states.nb rename to additional-analyses/across-states/across-states.nb diff --git a/across-states/covid_tracking_current.csv b/additional-analyses/across-states/covid_tracking_current.csv similarity index 100% rename from across-states/covid_tracking_current.csv rename to additional-analyses/across-states/covid_tracking_current.csv diff --git a/across-states/figures/proportion_vs_cfr.png b/additional-analyses/across-states/figures/proportion_vs_cfr.png similarity index 100% rename from across-states/figures/proportion_vs_cfr.png rename to additional-analyses/across-states/figures/proportion_vs_cfr.png diff --git a/across-states/strain_to_clade.tsv b/additional-analyses/across-states/strain_to_clade.tsv similarity index 100% rename from across-states/strain_to_clade.tsv rename to additional-analyses/across-states/strain_to_clade.tsv diff --git a/across-states/strain_to_state.tsv b/additional-analyses/across-states/strain_to_state.tsv similarity index 100% rename from across-states/strain_to_state.tsv rename to additional-analyses/across-states/strain_to_state.tsv