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faster raxml flags

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1 parent 85bfe2f commit 08995ad08b93da3aaaa11821909b06ece724f447 @blackrim committed Apr 25, 2012
Showing with 1 addition and 1 deletion.
  1. +1 −1 src/main.cpp
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@@ -340,7 +340,7 @@ int main(int argc, char* argv[]){
remove(("RAxML_info."+gene+".outlierdet").c_str());
string treerunstr = "raxmlHPC-PTHREADS-SSE3 -T "+int_to_string(numthreads)+" -p 12345 -f E -m GTRCAT -c 8 -s "+(gene+".FINAL.phy")+" -n "+gene+".outlierdet";
system(treerunstr.c_str());
- treefile = "RAxML_bestTree."+gene+".outlierdet";
+ treefile = "RAxML_fastTree."+gene+".outlierdet";
}else{
treefile = outliertreefile;
}

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