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debugging outliers

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blackrim committed Apr 25, 2012
1 parent bcf932b commit 11f172911bdd64c912bcff3b127b60e1c1314ae9
Showing with 1 addition and 1 deletion.
  1. +1 −1 src/main.cpp
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@@ -358,7 +358,7 @@ int main(int argc, char* argv[]){
if (outliertreerooted == false){
cout << "attempting to root based on taxonomy" << endl;
get_earliest_branch_representation(db,clade,outliertree);
- cout << outliertree->getRoot()->getNewick()<<endl;
+ cout << outliertree->getRoot()->getNewick(false)<<endl;
}
cout << "calculating taxonomic outliers" << endl;
get_taxonomic_outliers(outliertree,db,taxcutoff,gene);

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