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  • Max Delbrueck Center for Molecular Medicine
  • Berlin, Germany

Organizations

@BIMSBbioinfo

Pinned repositories

  1. BIMSBbioinfo/pigx_crispr

    A workflow to analyse sequence mutations in CRISPR-CAS9 targeted amplicon sequencing data

    R

  2. BIMSBbioinfo/pigx_rnaseq

    Pipeline for RNAseq

    Shell 5 3

  3. BIMSBbioinfo/pigx_scrnaseq

    Pipeline for analysis of Dropseq single cell data

    Python 2 2

  4. BIMSBbioinfo/RCAS

    R package for the RNA Centric Annotation System (RCAS)

    R 1 1

  5. BIMSBbioinfo/slimR

    Short Linear Motif (SLiM) Analysis in the context of human diseases

    R 1

  6. BIMSBbioinfo/pigx

    Pipelines in genomics

    Python 1 1

698 contributions in the last year

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Contribution activity

July 2018

Created an issue in BIMSBbioinfo/pigx_rnaseq that received 1 comment

integrate RUVseq for batch correction

This can be provided as an option to the user to apply RUVseq on the expression data. Minimally, RLE/PCA/heatmap/corrplot plots that compare before…

1 comment

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