The goal of
phenotypr is to predict a phenotype form EHR data using
both ICD diagnosis codes and NLP processed notes.
You can install phenotypr from github with:
# install.packages("devtools") devtools::install_github("borishejblum/phenotypr")
This software is partly based on ideas developped in :
Yu, S. et al. Toward high-throughput phenotyping: Unbiased automated feature extraction and selection from knowledge sources. J. Am. Med. Informatics Assoc. 22, 993–1000 (2015).