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Deleted unneeded guard clause for large proteomes in lipop_scrape_web…

… and tmhmm_scrape_web
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boscoh committed Jan 24, 2013
1 parent e6464c5 commit 2cd59923fe104781d05fc9dcea870cb63402bc99
@@ -38,11 +38,6 @@ def annotate(params, proteins, \
baseurl = "http://www.cbs.dtu.dk"
url = baseurl + "/cgi-bin/webface2.fcgi"
- if len(proteins) > 4000:
- log_stderr("# ERROR: The LipoP web inteface does not accept > \
- 4000 sequences at one time.")
- return
-
# grab the cached results if present
outfile = "lipop_scrape_web.out"
if not force and os.path.isfile(outfile):
@@ -9,7 +9,7 @@
'name': "SignalP 4.0"
}
-__DEBUG__ = False
+__DEBUG__ = True
import sys, os, time, json
from suds.client import Client
@@ -37,11 +37,6 @@ def annotate(params, proteins, \
baseurl = "http://www.cbs.dtu.dk"
url = baseurl + "/cgi-bin/nph-webface"
- if len(proteins) > 4000:
- log_stderr("# ERROR: The TMHMM web inteface does not accept > \
- 4000 sequences at one time.")
- return
-
# grab the cached results if present
outfile = "tmhmm_scrape_web.out"
if not force and os.path.isfile(outfile):

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