Skip to content
Basic scripts for QC and analysis of Illumina MiSeq data
Branch: master
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Type Name Latest commit message Commit time
Failed to load latest commit information.
README.md
dada2.r
deunique_dada2.py

README.md

seq_data_scripts

Basic scripts for QC and analysis of Illumina MiSeq data

dada2.r - the script to execute the dada2 package in R, this will QC, denoise, and merge PE reads

deunique_dada2.py - this script will take a csv file as output by dada2.r and expand it to create a redundant fasta file

You can’t perform that action at this time.
You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. Reload to refresh your session.