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title Chemical Blood Tests Dataset
buildConcepts chemicalBloodTests.tsv chemicalBloodTests.csv
../settings.scroll
viewSourceBaseUrl https://github.com/breck7/breckyunits.com/blob/main/ketones
metaTags
../gazetteTag.scroll
homeButton
../index.html
viewSourceButton
wideColumns 1
printTitle
printViewSource
This file generates a TSV dataset of blood chemistry tests. I created it for the blog post "Ketones vs Lithium".
link chemicalBloodTests.tsv TSV
link chemicalBloodTests.scroll This file
../ketonesVsLithium.html Ketones vs Lithium
It is specific to blood chemistry tests. So there are no urine tests. And it is not about blood cell tests. And it does not gain blood gas tests. Generally it is a collection of information on levels of chemicals in blood plasma.
This dataset was created to see how common it is for the target levels of certain chemicals in blood to fall between 0.8 and 3.0 mmol/L.
At some point, I would like to add fields to get some measure on how popular each test is. Also, I want to add categories for each test (ie, electrolytes, Hormones, etc), and what the test method is (for example, Ion-Selective Electrode, Atomic Absorption Spectroscopy, Inductively Coupled Plasma Mass Spectrometry or Flame Emission Spectroscopy). I also want to add chemical formulas. It is likely that all the measures I would want to add are already present in HMDB.
https://hmdb.ca/metabolites?utf8=%E2%9C%93&filter=true&quantified=1&blood=1&filter=true HMDB
table
printTable
tableSearch
# Schema
belowAsCodeUntil // endSchema
// id
idParser
extends abstractIdParser
boolean isMeasureRequired true
bottomParser
extends abstractFloatMeasureParser
description The bottom of the normal healthy range. In mmol/L. If there are numerous healthy ranges available, choose one for a 30 year old healthy male.
float sortIndex 1.5
topParser
extends abstractFloatMeasureParser
description The top of the normal healthy range. In mmol/L. If there are numerous healthy ranges available, choose one for a 30 year old healthy male.
float sortIndex 1.6
canTestAtHomeParser
extends abstractBooleanMeasureParser
description A boolean value indicating whether the whole test can be performed at home. If there is a valid url for testAtHome, then this should be true, otherwise false.
endogenousParser
extends abstractBooleanMeasureParser
description Is this produced anywhere in the human body?
chemicalWikipediaPageParser
extends abstractUrlMeasureParser
description URL to the Wikipedia page.
diagramParser
extends abstractUrlMeasureParser
description URL to the Wikipedia page.
akaParser
extends abstractStringMeasureParser
description A comma separated list of other names for this chemical, such as brand names.
bloodTestWikipediaPageParser
extends abstractUrlMeasureParser
description If there is a wikipedia page not only about the chemical, but specifically about blood tests for that chemical, include that here.
testAtLabParser
extends abstractUrlMeasureParser
description A URL to buy/schedule an in lab test. Multiple are okay.
testAtHomeParser
extends abstractUrlMeasureParser
description A URL to buy an at home, instant test kit (NOT a kit that requires mailing in), usually involving disposable test strips. Multiple are okay.
testByMailParser
extends abstractUrlMeasureParser
description A URL to buy a kit where you can draw blood at home but then must MAIL it into a lab. Multiple are okay.
// endSchema
# Rows
belowAsCodeUntil // endRows
id Glucose
diagram https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/cid/5793/PNG
chemicalWikipediaPage https://en.wikipedia.org/wiki/Glucose
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Blood_sugar
bottom 3.9
top 5.6
testAtLab https://www.questhealth.com/product/diabetes-risk-panel-94341M.html
testAtHome https://shop.keto-mojo.com/products/keto-mojo-gk-plus-blood-glucose-ketone-meter-basic-starter-kit
canTestAtHome true
id Lithium
diagram https://upload.wikimedia.org/wikipedia/commons/thumb/8/83/Lithium_paraffin.jpg/800px-Lithium_paraffin.jpg
chemicalWikipediaPage https://en.wikipedia.org/wiki/Lithium
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Lithium_pharmacology#Measurement
bottom 0.4
top 1.2
testAtLab https://www.ondemand.labcorp.com/lab-tests/lithium
canTestAtHome false
id Ketones
diagram https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/cid/180/PNG
chemicalWikipediaPage https://en.wikipedia.org/wiki/Ketone_bodies
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Ketone_bodies#Blood_testing
bottom 0.0
top 0.6
testAtLab https://www.walkinlab.com/products/view/ketone-blood-test
testAtHome https://shop.keto-mojo.com/products/keto-mojo-gk-plus-blood-glucose-ketone-meter-basic-starter-kit
canTestAtHome true
id Creatinine
diagram https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/cid/588/PNG
chemicalWikipediaPage https://en.wikipedia.org/wiki/Creatinine
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Creatinine#Blood_test
bottom 0.06
top 0.12
testAtLab https://www.ondemand.labcorp.com/lab-tests/creatinine-blood-test
testAtHome https://www.cvs.com/shop/diathrive-kidney-function-test-strips-15ct-prodid-1170071
canTestAtHome true
id Calcium
diagram https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/cid/5460341/PNG
chemicalWikipediaPage https://en.wikipedia.org/wiki/Calcium
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Calcium_in_biology#Plasma
bottom 2.1
top 2.6
testAtLab https://www.ondemand.labcorp.com/lab-tests/calcium-test
testAtLab https://www.questhealth.com/product/calcium-test-303M.html
canTestAtHome false
id HDL Cholesterol
diagram https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/cid/24775087/PNG
chemicalWikipediaPage https://en.wikipedia.org/wiki/High-density_lipoprotein
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Lipid_profile
bottom 1.0
top 1.5
testAtLab https://www.ondemand.labcorp.com/lab-tests/lipid-panel
testAtHome https://www.everlywell.com/products/cholesterol-and-lipids-test/
canTestAtHome false
id Sodium
diagram https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/cid/5360545/PNG
chemicalWikipediaPage https://en.wikipedia.org/wiki/Sodium
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Serum_sodium
bottom 136
top 145
testAtLab https://www.ondemand.labcorp.com/lab-tests/basic-metabolic-panel
canTestAtHome false
id Potassium
diagram https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/cid/5462222/PNG
chemicalWikipediaPage https://en.wikipedia.org/wiki/Potassium
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Serum_potassium_test
bottom 3.5
top 5.1
testAtLab https://www.ondemand.labcorp.com/lab-tests/potassium-test
canTestAtHome false
id Chloride
diagram https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/cid/312/PNG
chemicalWikipediaPage https://en.wikipedia.org/wiki/Chloride
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Serum_chloride
bottom 98
top 107
testAtLab https://www.ondemand.labcorp.com/lab-tests/chloride-blood-test
canTestAtHome false
id Urea
diagram https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/cid/1176/PNG
chemicalWikipediaPage https://en.wikipedia.org/wiki/Urea
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Blood_urea_nitrogen
bottom 2.5
top 7.1
testAtLab https://www.ondemand.labcorp.com/lab-tests/urea-nitrogen-bun
canTestAtHome false
id Phosphate
diagram https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/cid/1061/PNG
chemicalWikipediaPage https://en.wikipedia.org/wiki/Phosphate
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Phosphate_test
bottom 0.81
top 1.45
testAtLab https://www.ondemand.labcorp.com/lab-tests/phosphorus-test
canTestAtHome false
id Magnesium
diagram https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/cid/888/PNG
chemicalWikipediaPage https://en.wikipedia.org/wiki/Magnesium
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Magnesium_test
bottom 0.66
top 1.07
testAtLab https://www.ondemand.labcorp.com/lab-tests/magnesium-test
canTestAtHome false
id Iron
diagram https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/cid/23925/PNG
chemicalWikipediaPage https://en.wikipedia.org/wiki/Iron
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Serum_iron
bottom 0.01
top 0.03
testAtLab https://www.ondemand.labcorp.com/lab-tests/iron-and-total-iron-binding-capacity-tibc
canTestAtHome false
id Triglycerides
diagram https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/cid/5460048/PNG
chemicalWikipediaPage https://en.wikipedia.org/wiki/Triglyceride
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Triglyceride_test
bottom 0.3
top 1.7
testAtLab https://www.ondemand.labcorp.com/lab-tests/triglycerides-test
canTestAtHome false
id Albumin
diagram https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/cid/16132389/PNG
chemicalWikipediaPage https://en.wikipedia.org/wiki/Human_serum_albumin
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Serum_albumin
bottom 0.57
top 0.8
testAtLab https://www.ondemand.labcorp.com/lab-tests/albumin-test
canTestAtHome false
id Total Protein
diagram https://upload.wikimedia.org/wikipedia/commons/thumb/c/ce/Protein_TIM_barrel.png/1920px-Protein_TIM_barrel.png
chemicalWikipediaPage https://en.wikipedia.org/wiki/Protein
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Serum_total_protein
bottom 0.06
top 0.08
testAtLab https://www.ondemand.labcorp.com/lab-tests/total-protein-test
canTestAtHome false
id Bilirubin
diagram https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/cid/5280352/PNG
chemicalWikipediaPage https://en.wikipedia.org/wiki/Bilirubin
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Bilirubin_test
bottom 0.003
top 0.02
testAtLab https://www.ondemand.labcorp.com/lab-tests/bilirubin-total
canTestAtHome false
id Alkaline Phosphatase
diagram https://upload.wikimedia.org/wikipedia/commons/thumb/5/5a/1ALK_Alkaline_Phosphatase.png/800px-1ALK_Alkaline_Phosphatase.png
chemicalWikipediaPage https://en.wikipedia.org/wiki/Alkaline_phosphatase
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Alkaline_phosphatase#Blood_test
bottom 0.5
top 1.5
testAtLab https://www.ondemand.labcorp.com/lab-tests/alkaline-phosphatase-alp
canTestAtHome false
id Aspartate Aminotransferase (AST)
diagram https://upload.wikimedia.org/wikipedia/commons/thumb/4/41/AST_dimer.png/800px-AST_dimer.png
chemicalWikipediaPage https://en.wikipedia.org/wiki/Aspartate_transaminase
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Aspartate_transaminase#Blood_test
bottom 0.008
top 0.04
testAtLab https://www.ondemand.labcorp.com/lab-tests/aspartate-aminotransferase-ast
canTestAtHome false
id Alanine Aminotransferase (ALT)
diagram https://upload.wikimedia.org/wikipedia/commons/thumb/c/c8/Protein_ALT_PDB_1zgy.png/800px-Protein_ALT_PDB_1zgy.png
chemicalWikipediaPage https://en.wikipedia.org/wiki/Alanine_transaminase
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Alanine_transaminase#Blood_test
bottom 0.007
top 0.056
testAtLab https://www.ondemand.labcorp.com/lab-tests/alanine-aminotransferase-alt
canTestAtHome false
id Gamma-Glutamyl Transferase (GGT)
diagram https://upload.wikimedia.org/wikipedia/commons/thumb/a/a3/PDB_2z8x_EBI.jpg/800px-PDB_2z8x_EBI.jpg
chemicalWikipediaPage https://en.wikipedia.org/wiki/Gamma-glutamyltransferase
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Gamma-glutamyl_transferase#Blood_test
bottom 0.007
top 0.05
testAtLab https://www.ondemand.labcorp.com/lab-tests/gamma-glutamyl-transferase-ggt
canTestAtHome false
id Thyroid Stimulating Hormone (TSH)
diagram https://upload.wikimedia.org/wikipedia/commons/thumb/4/4b/Thyrotropin.png/800px-Thyrotropin.png
chemicalWikipediaPage https://en.wikipedia.org/wiki/Thyroid-stimulating_hormone
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Thyroid_function_tests#TSH_test
bottom 0.0006
top 0.005
testAtLab https://www.ondemand.labcorp.com/lab-tests/thyroid-stimulating-hormone-tsh
canTestAtHome false
id Free Thyroxine (Free T4)
diagram https://upload.wikimedia.org/wikipedia/commons/thumb/9/9e/L-Thyroxine.svg/1920px-L-Thyroxine.svg.png
chemicalWikipediaPage https://en.wikipedia.org/wiki/Thyroxine
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Thyroid_function_tests#Free_T4
bottom 0.012
top 0.022
testAtLab https://www.ondemand.labcorp.com/lab-tests/free-thyroxine-free-t4
canTestAtHome false
id Vitamin D
diagram https://upload.wikimedia.org/wikipedia/commons/thumb/2/2c/Cholecalciferol.svg/1920px-Cholecalciferol.svg.png
chemicalWikipediaPage https://en.wikipedia.org/wiki/Vitamin_D
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Vitamin_D#Testing
bottom 0.05
top 0.15
testAtLab https://www.ondemand.labcorp.com/lab-tests/vitamin-d-25-hydroxy
testAtHome https://www.everlywell.com/products/vitamin-d-test/
canTestAtHome true
id Vitamin B12
diagram https://upload.wikimedia.org/wikipedia/commons/thumb/3/3b/Cobalamin.png/1920px-Cobalamin.png
chemicalWikipediaPage https://en.wikipedia.org/wiki/Vitamin_B12
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Vitamin_B12_deficiency#Diagnosis
bottom 0.0002
top 0.0007
testAtLab https://www.ondemand.labcorp.com/lab-tests/vitamin-b12
testAtHome https://www.letsgetchecked.com/us/en/home-vitamin-test/
canTestAtHome true
id Folic Acid
diagram https://upload.wikimedia.org/wikipedia/commons/thumb/6/60/Folic_acid.svg/1920px-Folic_acid.svg.png
chemicalWikipediaPage https://en.wikipedia.org/wiki/Folic_acid
bloodTestWikipediaPage https://en.wikipedia.org/wiki/Folate_deficiency#Diagnosis
bottom 0.0067
top 0.047
testAtLab https://www.ondemand.labcorp.com/lab-tests/folate
canTestAtHome false
id C-Reactive Protein (CRP)
diagram https://upload.wikimedia.org/wikipedia/commons/thumb/6/6a/C-reactive_protein_pentamer_from_PDB_1b09.png/800px-C-reactive_protein_pentamer_from_PDB_1b09.png
chemicalWikipediaPage https://en.wikipedia.org/wiki/C-reactive_protein
bloodTestWikipediaPage https://en.wikipedia.org/wiki/C-reactive_protein#Blood_test
bottom 0.008
top 0.01
testAtLab https://www.ondemand.labcorp.com/lab-tests/c-reactive-protein-crp-high-sensitivity
canTestAtHome false
// # Notes
Traditional CRP measurement only detected CRP in the range of 10 to 1,000 mg/L, whereas high sensitivity CRP (hs-CRP) detects CRP in the range of 0.5 to 10 mg/L.
id Erythrocyte Sedimentation Rate (ESR)
diagram https://upload.wikimedia.org/wikipedia/commons/thumb/d/d2/Westergren_ESR_tube.JPG/800px-Westergren_ESR_tube.JPG
chemicalWikipediaPage https://en.wikipedia.org/wiki/Erythrocyte_sedimentation_rate
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id Glycerol