diff --git a/docs/install.rst b/docs/install.rst index 223a3fb7..8582c97e 100644 --- a/docs/install.rst +++ b/docs/install.rst @@ -10,6 +10,8 @@ Step 2: Configure Conda Software used by the cms project is distributed through the bioconda channel for the conda package manager. It is necessary to add this channel to the conda config:: conda config --add channels bioconda + conda config --add channels r + conda config --add channels conda-forge Step 3: Make a conda environment and install cms @@ -19,7 +21,7 @@ It is recommended to install cms into its own conda directory. This ensures its A new conda environment can be created with the following command, which will also install relevant cms dependencies. It is recommended to use the Python3 version of the environment file:: - conda env create -f=conda-environment_py3.yaml -n cms-env3 + conda env create -f conda-environment_py3.yaml -n cms-env3 Step 4: Activate the cms environment