Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
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cjllanwarne Assert HTTP inputs work in CWL (#4392)
Assert HTTP inputs work in CWL
Latest commit fc470b5 Nov 20, 2018
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.github add issue template so people can be directed to the forums naturally (#… Jun 14, 2018
.idea/inspectionProfiles move cromwell Feb 25, 2018
CromIAM/src [Test Reliability] More time for SubmissionSupportSpec (#4385) Nov 15, 2018
backend Assert HTTP inputs work in CWL (#4392) Nov 20, 2018
centaur Assert HTTP inputs work in CWL (#4392) Nov 20, 2018
centaurCwlRunner/src Allow relative imports from URL-submitted CWL (#4308) Nov 16, 2018
cloud-nio Updates for TESK demo (#4168) Oct 2, 2018
cloudSupport/src Un-hardcode AWS Region (#4228) Oct 17, 2018
common/src Allow relative imports from URL-submitted CWL (#4308) Nov 16, 2018
core/src Assert HTTP inputs work in CWL (#4392) Nov 20, 2018
cromwellApiClient/src Perf reporting (#4123) Sep 24, 2018
cwl/src Allow relative imports from URL-submitted CWL (#4308) Nov 16, 2018
cwlEncoder/src/main/scala/cwl/encoder Changed circe codecs from auto to semi-auto. Oct 23, 2018
database Database-driven abort. (#4401) Nov 19, 2018
docker move cromwell Feb 25, 2018
dockerHashing/src Tweaks to test timeouts. Oct 23, 2018
docs Assert HTTP inputs work in CWL (#4392) Nov 20, 2018
engine/src Database-driven abort. (#4401) Nov 19, 2018
filesystems Better message for bad FS path (#4262) Oct 17, 2018
languageFactories Database-driven abort. (#4401) Nov 19, 2018
perf/src/main Changed circe codecs from auto to semi-auto. Oct 23, 2018
project BCBIO improvements part 1 (#4358) Nov 6, 2018
release changed github clones back to ssh; changed jar paths Oct 17, 2018
scripts Call cache copy fail blacklisting. (#4359) Nov 8, 2018
server/src Assert HTTP inputs work in CWL (#4392) Nov 20, 2018
services/src Synchronize instrumentation with the actor (#4402) Nov 19, 2018
src/ci Support InputResourceRequirement (#4371) Nov 15, 2018
supportedBackends Assert HTTP inputs work in CWL (#4392) Nov 20, 2018
wdl WDL Directory (#3980) Nov 14, 2018
wes2cromwell/src/main Map the Cromwell statuses to WES statuses (#4199) Oct 9, 2018
wom/src Support InputResourceRequirement (#4371) Nov 15, 2018
womtool WDL Directory (#3980) Nov 14, 2018
.dockerignore move cromwell Feb 25, 2018
.gitattributes move cromwell Feb 25, 2018
.gitignore aws wiring Sep 26, 2018
.pullapprove.yml Batch it pullapprove (#3898) Jul 13, 2018
.sbtopts SBT opts plus release wdl updates. Jun 4, 2018
.travis.yml aws wiring Sep 26, 2018
AUTHORS move cromwell Feb 25, 2018
CHANGELOG.md Assert HTTP inputs work in CWL (#4392) Nov 20, 2018
LICENSE-ASL-2.0 move cromwell Feb 25, 2018
LICENSE.txt move cromwell Feb 25, 2018
README.md move cromwell Feb 25, 2018
build.sbt StatsD in CromIAM (#4293) Oct 23, 2018
codecov.yml move cromwell Feb 25, 2018
cromwell.examples.conf Database-driven abort. (#4401) Nov 19, 2018
mkdocs.yml CWL parsing docs ["from 10,000 feet" edition] (#4283) Nov 13, 2018

README.md

Build Status codecov

Welcome to Cromwell

Cromwell is a Workflow Management System geared towards scientific workflows. Cromwell is open sourced under the BSD 3-Clause license.

The Cromwell documentation has a new home, click here to check it out!

First time to Cromwell? Get started with Tutorials!

Jamie, the Cromwell pig