Fix some GATK doc issues #6318
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Fix some GATK doc issues #6318
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The current top-level index document has a bogus tool category called "tools" in it (see https://software.broadinstitute.org/gatk/documentation/tooldocs/current/). This is created by the
@DocumentedFeatureannotation on the AlleleFrequency stratifier class. We don't actually have a category for this, and most are not documented. If at some point we want to add those, we can do so with a real category, but for now this removes the annotation.There are also some unnatural line breaks in the index, which are removed here. The html doc could use some more maintenance cleanup, but this fixes those two obvious issues.