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A set of tools (in Java) for working with next generation sequencing data in the BAM (http://samtools.github.io/hts-specs) format.

Merge pull request #164 from broadinstitute/nh_163

Add command line support for setting @RG-PG and @RG-PM in FastqToSam and...
latest commit d7d30fbb12
Nils Homer nh13 authored

README.md

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A set of Java command line tools for maniuplating high-throughput sequencing data (HTS) data and formats.

Picard is implemented using the HTSJDK Java libraryHTSJDK, supporting acce accessing of common file formats, such as SAM and VCF, used for high-throughput sequencing data.

Please see the Picard Documentation for more information.

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