ClusteredCrosscheckMetric.java

/*
 * The MIT License
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 * Copyright (c) 2015 The Broad Institute
 *
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package picard.fingerprint;

import picard.util.ReflectionUtil;

/**
 * A Metric class to hold the result of clustered crosschecking fingerprints.
 * The same metric will be used for crosschecking Readgroups, libraries, samples, or files.
 *
 * @author Yossi Farjoun
 */

public class ClusteredCrosscheckMetric extends CrosscheckMetric {
    // Number indicating the cluster to which the groups within this metric belong.
    // Metric-lines involving groups that are not in the same cluster should either
    // be excluded, or given an error-indicating CLUSTER value (perhaps MIN_VALUE?).
    public Integer CLUSTER;

    public Integer CLUSTER_SIZE;

    public ClusteredCrosscheckMetric() {
        super();
    }

    public ClusteredCrosscheckMetric(CrosscheckMetric metric) {
        super();
        ReflectionUtil.copyFromBaseClass(metric, this);
    }
}