Commits on Apr 26, 2017
  1. Optional flag to add an attribute in the SAM/BAM file used to store t…

    …he size of a duplicate set. A separate attribute is also added to store which read was selected as representative out of a duplicate set.
    lhogstrom committed with lhogstrom Jun 13, 2016
Commits on Aug 3, 2016
  1. adding a settings.gradle file

    this sets the project name so that jars will have consistent names
    without the settings.gradle file, the project name is taken from the folder name which is not ideal
    lbergelson committed Aug 3, 2016