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2.23.4

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@snovod snovod released this 03 Sep 17:47
· 119 commits to master since this release
571ec3a
  • Adjust MBA read overhang clipping to be consistent with past behavior (#1571)
    • add support for CRAM reading in IdentifyContaminant and ExtractFingerprint (#1572)
  • Yf fix typo in histogram column name asm (#1568)
  • Use new IntervalMergingIterator to merge intervals on the fly (#1456)
  • Several changes to metrics collections (AlignmentSummaryMetrics and WgsMetrics) + some fluff (#1555)
  • Make Fingerprint checking fail when run on a truly unsorted file (currently it returns a non-informative fingerprint) (#1556)
  • Added a simple test for LiftoverHaplotypeMap (#1550)