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GA4GH Tool Execution Challenge Phase 1 #97
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vdauwera
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from geoffjentry
Feb 28, 2017
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geoffjentry
Mar 1, 2017
Member
Consider this optional to actually change but a good rule of thumb is to end files with a \n as if you cat them your prompt winds up on its own line, which is handy
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vdauwera
merged commit a8b6234
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Mar 4, 2017
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Approval required by 2 of: cjllanwarne, geoffjentry, Horneth, katevoss, kcibul, kshakir, mcovarr, ruchim
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mcovarr
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gvda_ga4gh_tools_phase1 branch
Jul 25, 2017
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vdauwera commentedFeb 28, 2017
Files and readme for the GA4GH Tool Execution Challenge Phase 1 entry for Cromwell running on Google Genomics API wdl_runner as documented here.
For the record I also made a FireCloud entry here using the same files.
The primary purpose of storing these in the WDL repo is to keep a record of our entry associated with WDL, independently of the challenge platform. It also makes for a good minimal example of using the wdl_runner for non-GATK purposes.