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0.5.0

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@aarpon aarpon released this 25 Oct 14:23
· 175 commits to master since this release
0.5.0
396fc1a

Changelog

This version fixes a few bugs and adds a few new features; notably it adds a built-in 3D viewer, new color-coding options and the possibility of adding a confocal image as canvas background directly from an MSR file.

New features

  • Add high-performance 3D viewer for localization plotting.
  • Allow loading confocal images from MSR files to display along with the MINFLUX localizations.
  • Add pyminflux.reader.MSRReader class to API to load both data and metadata from MSR files.
  • Expand list of options (nothing, tid, fluorophore, depth, time) for color-coding.
  • All parameters can now be color-coded.
  • Add colorbar to the 2D and 3D plots when color-coding by depth and time.
  • Allow color unmixing on filtered dataset.
  • Always calculate the total trace duration, not only for tracking datasets.
  • Add "Export all plots" option to the context menu of the results histograms in the Analyzer.
  • Add parameter "tim_tot" to the list of options in the Histogram Plotter.
  • Allow exporting 3D plots and colorbars as high-resolution PNG images.

Bug fixes

  • Run global filters after updating the min trace length in the MinFluxProcessor.
  • Fix the x-axis limits in the Color Unmixer for the DCR histogram to (0.0, 1.0).

Troubleshooting

Since the pyMINFLUX.exe and pyMINFLUX.app applications are not (yet) digitally signed, both Windows and macOS may prevent the application from starting. If you encounter any problem, please have a look at our troubleshooting guide.

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