• Buenrostro Lab Webpage Repo

    HTML 3,601 MIT Updated Jul 10, 2018
  • Preprocessing pipeline for (sc)ATAC data

    Python 5 MIT Updated Jun 22, 2018
  • Simple reproducible managment of annotated TSS and gene bodies

    Shell Updated Jun 7, 2018
  • R package with motifs for use with chromVAR

    R 1 4 Updated Nov 16, 2017
  • Repo for walking through a chromVAR sample analysis

    HTML 1 Updated Aug 8, 2017
  • Sample repo for running DESeq2 on HTSeq (counts)

    Updated Jul 8, 2017
  • This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/cellscape.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=cellscape.

    JavaScript Updated Jun 18, 2017
  • PEAT

    Forked from jhhung/PEAT

    An ultra fast and accurate paired-end adapter trimmer that needs no a priori adapter sequences.

    C++ 6 GPL-2.0 Updated Jun 13, 2017
  • Repo for generating custom blacklist for reads originating from mitochondrial DNA to nuclear genome

    Shell 1 1 Updated Jun 12, 2017
  • R package for easy mm9 <-> mm10 / hg19 <-> hg38

    R 1 MIT Updated May 21, 2017
  • 07March Runs at first

    R Updated May 7, 2017
  • Institutional Knowledge, Tips, & Tricks

    HTML Updated Apr 22, 2017
  • Analyses pertaining to ImmGen

    HTML 1 MIT Updated Feb 17, 2017
  • Mouse kmer corr

    HTML Updated Feb 5, 2017
  • Inferring CNV from Single-Cell RNA-Seq

    R 24 Updated Jan 23, 2017
  • Repository for code/data for mouse heme RNA/ATAC/ChIP-Seq

    R Updated Jan 15, 2017
  • v1.1.0

    R Updated Jan 6, 2017
  • Deviation scores for GWAS hits

    R MIT Updated Dec 22, 2016
  • CALs Presentation for ImmGen

    CSS Updated Dec 9, 2016
  • Code and summary data repo for 10x scRNAseq project

    R MIT Updated Nov 21, 2016
  • Updated Nov 13, 2016
  • Shiny app for Repr scRNAseq

    R Updated Nov 11, 2016
  • Rcpp package for various functions

    R MIT Updated Oct 28, 2016
  • R 6 Updated Oct 20, 2016
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