/padlock-pipeline

Permalink
Switch branches/tags
Nothing to show
Commits on Dec 11, 2014

  1. Added script to find CpGs in fasta file

    committed Dec 11, 2014
    7664200
Commits on Nov 9, 2014

  1. Updated rST

    committed Nov 9, 2014
    6ea7751

  2. Updated rST

    committed Nov 9, 2014
    3fe1343
Commits on Nov 8, 2014

  1. Updated rST

    committed Nov 8, 2014
    e725295

  2. Updated rST

    committed Nov 8, 2014
    e869d19

  3. Clarified instructions

    committed Nov 8, 2014
    5a2d510

  4. Updated README and renamed pipeline script

    committed Nov 8, 2014
    c86a62b

  5. Added phiX genome, and flattened sequences/bismark/* to sequences/*

    committed Nov 8, 2014
    91a1070

  6. Fixed bugs in pipeline script caused by github migration

    committed Nov 8, 2014
    e383d6d

  7. Committed main bismark-based pipeline script for padlock alignment

    committed Nov 8, 2014
    9b0eea7

  8. Adding script for capture-c probe filtering

    committed Nov 8, 2014
    293069b

  9. Added script for merging bismark coverage files

    committed Nov 8, 2014
    3b0392e

  10. Added modified bismark coverage script

    committed Nov 8, 2014
    d1dd678

  11. Added capture-c probe creation script

    committed Nov 8, 2014
    15b0ffd
Commits on Nov 7, 2014

  1. Ignoring lib/ dir

    committed Nov 7, 2014
    7e6837f

  2. Added bowtie to makefile

    committed Nov 7, 2014
    c3295b0

  3. Adding dummy file to lib directory so directory will exist after clon… 

    …e/checkout
    committed Nov 7, 2014
    9376c68

  4. Adding adapter/noise file for trimming

    committed Nov 7, 2014
    a32dbc2

  5. Adding makefile to get necessary programs

    committed Nov 7, 2014
    c1e5f44

  6. Initial commit with .gitignore

    committed Nov 7, 2014
    2ba988b
Commits on Nov 6, 2014

  1. Initial commit

    committed Nov 6, 2014
    60435bd