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20130606_g1k.ped
vis update
May 12, 2019
LICENSE
Initial commit
Jun 11, 2015
LICENSE.txt
PharmGKB genes license
May 18, 2021
PCA.Rmd
Added warning about windows
Jul 7, 2017
PCA_overview.rmd
typos
Apr 12, 2017
PCA_whole_genome.Rmd
vis
May 13, 2019
README.md
added some perf results
Apr 14, 2017
chr21.head.vcf.gz
tiny examples added
Nov 13, 2016
chr22.head.vcf.gz
tiny examples added
Nov 13, 2016
chunked.out
vis update
May 12, 2019
doubler-smp.R
notes and a crude SMP doubler/simulator for larger problems
Apr 12, 2017
exm.Rmd
typos
Dec 28, 2015
fig1.png
Improved figure, fixed typos
Jul 2, 2015
genes.tsv
ranges example
May 18, 2021
notes.rmd
Added better SMP version pca-fork.R
Apr 18, 2017
parse.c
Fix updated variant file name, see issue #2
Jul 6, 2017
pca-doredis.R
doRedis example
Apr 17, 2017
pca-fork.R
fork
Jan 26, 2018
pca-mpi.R
Updated notes in pca-mpi.R
Jul 20, 2017
pca-smp.R
Added NP option
Apr 14, 2017
pca.rdata
vis update
May 12, 2019
ranges.Rmd
ranges example
May 18, 2021
snp.png
Added short overview
Apr 11, 2017
snp.ref
Added short overview
Apr 11, 2017
snp1.png
Added short overview
Apr 11, 2017
some_results.rmd
notes
Apr 14, 2017
unit.R
added example test and self-contained parse files
Oct 11, 2016