Pinned repositories

  1. cbioportal

    cBioPortal for Cancer Genomics

    JavaScript 193 187

  2. datahub

    A centralized location for storing curated data ready for inclusion in cBioPortal.

    HTML 22 13

  3. cbioportal-frontend

    React Frontend of cBioPortal 🎉

    TypeScript 13 47

  • React Frontend of cBioPortal 🎉

    TypeScript 13 47 AGPL-3.0 Updated Jul 15, 2018
  • cBioPortal for Cancer Genomics

    JavaScript 193 187 AGPL-3.0 11 issues need help Updated Jul 14, 2018
  • Contains tools used by cBioPortal data curators when preparing data for upload into the datahub repos.

    Python 1 AGPL-3.0 Updated Jul 13, 2018
  • Java 3 15 CC-BY-4.0 Updated Jul 13, 2018
  • cBioPortal Study View

    JavaScript 2 6 Updated Jul 13, 2018
  • A centralized location for storing curated data ready for inclusion in cBioPortal.

    HTML 22 13 1 issue needs help Updated Jul 12, 2018
  • Clinical Attribute Web Service for retrieving clinical attribute names and metadata.

    Java 4 Updated Jul 10, 2018
  • SQLPL AGPL-3.0 Updated Jun 30, 2018
  • Cancer Hotspots

    JavaScript 2 5 AGPL-3.0 Updated Jun 28, 2018
  • Context to create cBioPortal docker images

    9 Updated Jun 8, 2018
  • OncoPrint visualization

    JavaScript 15 9 LGPL-3.0 Updated May 25, 2018
  • JavaScript 2 5 Updated May 12, 2018
  • Foundation Medicine XML file to cBioPortal staging file converter.

    Java 1 2 AGPL-3.0 Updated Apr 27, 2018
  • R-Based API for accessing the MSKCC Cancer Genomics Data Server (CGDS)

    R 13 9 LGPL-3.0 Updated Apr 6, 2018
  • GSoC : Spring-batch based system to extract and transform GDC hosted data to suitable cBioPortal file formats.

    1 AGPL-3.0 Updated Feb 7, 2018
  • The research and processing repo for import of CPTAC data into cBioPortal

    Jupyter Notebook MIT Updated Jan 11, 2018
  • Use d3-timeline to visualize clinical data

    JavaScript 11 9 LGPL-3.0 Updated Dec 15, 2017
  • Java 2 5 Updated Nov 16, 2017
  • igv.js

    Forked from igvteam/igv.js

    Lightweight html5 version of the Integrative Genomics Viewer

    JavaScript 77 MIT Updated Oct 10, 2017
  • Java 2 Updated Sep 18, 2017
  • Tools and data relating to clinical data normalization efforts.

    Python 3 AGPL-3.0 Updated Sep 4, 2017
  • Contains code for a cBioPortal data importer.

    1 1 Updated Jun 15, 2017
  • A Swagger Codegen for typescript, nodejs & angularjs

    JavaScript 176 Apache-2.0 Updated Feb 24, 2017
  • Documentation repository of Google Summer of Code (GSoC) project ideas for cBioPortal and related projects

    17 11 Updated Jan 11, 2017
  • JavaScript 12 17 LGPL-3.0 Updated Dec 30, 2016
  • Fast, flexible, and simple data tables in React

    JavaScript 235 MIT Updated Nov 2, 2016
  • HTML 1 Updated Sep 2, 2016
  • Repository to hold common persistence/model modules & packages used by at least the web application and importer projects.

    1 AGPL-3.0 Updated Sep 2, 2016
  • Specification of web API of the cBioPortal

    2 1 AGPL-3.0 Updated Aug 26, 2016
  • JavaScript 1 Updated Jul 28, 2016