Curated list of open-access databases with human structural MRI data
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README.md openfmri becomes openneuro Apr 25, 2018
conda_env.yml added env and corr download Aug 29, 2017
download_corr.ipynb added env and corr download Aug 29, 2017

README.md

openMorph

Curated list of open-access databases with human structural MRI data.

Feel free to make additions/updates via pull requests!

For an overview of benefits and considerations related to using open-access data for brain morphology research, see Madan (2017) Front Hum Neurosci [10.3389/fnhum.2017.00405].

ADNI

ABIDE

ADHD-200

Age-ility

AIBL

BRAINS

CamCAN

CMI-HBN

COBRE

CoRR

DLBS

fBIRN

GSP

HCP

IXI

Kirby 21

MASSIVE

Mindboggle-101

MIRIAD

MPI-LMBB

MSC

NACC

NCANDA

NKIRS

OASIS cross-sectional

OASIS longitudinal

OpenNeuro (former OpenfMRI)

PING

PNC

PTBP

SALD

SchizConnect

studyforrest

  • http://studyforrest.org
    • N=20
    • T1, T2, dMRI, SWI, angiography
    • up to 10+ hours of 7T and 3T fMRI per subject (2h hollywood movie [audio and/or audio-visual], localizers, retinotopic mapping, with simult. cardiac/resp, partially with simult. eyetracking)
      • extensive movie stimulus annotations
    • musical education, visual acuity, visual sensitivity
  • Hanke et al. (2014) [10.1038/sdata.2014.3]

T1-250μm

Test-Retest Reliability of Brain Volume Measurements

UK Biobank

Download the Data

CoRR Download

The download_corr.ipynb jupyter notebook contains a script to webscrape the CoRR website and download the appropriate datasets.

Conda Environment

The conda_env.yml file contains the environment used to run the jupyter notebook. To create a conda environment from that file, execute conda env create -f conda_env.yml