Fixed error caused by summary.sdreport not being exportet in recent v…

…ersions of TMB
calbertsen · Sep 7, 2015 · 01f0b25 · 01f0b25
1 parent c3e70ca
commit 01f0b25
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,7 +1,7 @@
 Package: argosTrack
 Type: Package
 Title: Fit movement models to Argos data for marine animals
-Version: 0.1.0
+Version: 0.1.1
 Date: 2015-08-17
 Author: Christoffer Moesgaard Albertsen
 Maintainer: Christoffer Moesgaard Albertsen <cmoe@aqua.dtu.dk>

diff --git a/NEWS b/NEWS
@@ -1,3 +1,7 @@
+# Version 0.1.1
+- Fixed error caused by TMB no longer exporting summary.sdreport
+
+
 # Version 0.1.0
 - Added movement models: Random Walk (rw) and Multiple Persistence Continuous Time Correlated Random Walk (mpctcrw)
 - New residual types (besided the old ”smooth”): Smooth predictions (”smoothpred”), Simulated residuals (”simulated”), and one step residuals (”onestep”)

diff --git a/R/argostrack.R b/R/argostrack.R
@@ -240,7 +240,7 @@ argosTrack <- function(lon,lat,dates,locationclass,
 
     esttime <- system.time(opt <- nlminb(obj$par,obj$fn,obj$gr,control=nlminb.control))
 
-    srep <- TMB::summary.sdreport(TMB::sdreport(obj))
+    srep <- TMB:::summary.sdreport(TMB::sdreport(obj))
     track <- srep[rownames(srep)=="mu",]
     sdtrack <- matrix(track[,2],nrow=2)
     esttrack <- matrix(track[,1],nrow=2)