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README.md

ResazurinMIC

A new rapid resazurin-based microdilution assay for antimicrobial susceptibility testing of Neisseria gonorrhoeae

Contains raw data, analysis pipeline and summary statistics needed to calculate an MIC from dose response curves

To run the pipeline to reproduce all figures the Rscript 00_full_pipeline.R (in the folder scripts) needs to be sourced. Results can be found in the folder output/tables and output/figures.

Summary statistics and detailled documentation can be found following the link below:

https://www.dropbox.com/s/otrcmyf8sdn6hue/12_summary_stats.html?dl=0 (Note the file isnt displayed in the browser (Error (400)), it needs to be downloaded)