@canlab

Cognitive Affective Neuroscience Laboratory

Pinned repositories

  1. CanlabCore

    Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level…

    Matlab 39 28

  2. MediationToolbox

    Single-level and multi-level mediation analyses for any kind of data, with bootstrap-based significance testing. Neuroimaging-oriented functions allow for mediation effect parametric mapping (mappi…

    Matlab 11 4

  3. Neuroimaging_Pattern_Masks

    Brain signature patterns, atlases of regions, and meta-analysis masks for neuroimaging data analysis.

    Matlab 7 3

  4. Canlab_MKDA_MetaAnalysis

    Coordinate-based meta-analysis for neuroimaging using Multilevel Kernel Density Analysis and various other statistical tools (chi-square, clustering, correspondence analysis, parcellation)

    Matlab 5 5

  5. CANlab_help_examples

    How-to examples and a batch pipeline for second-level neuroimaging analysis. Batch scripts and examples publish HTML files with code and output.

    Matlab 2 3

  6. RobustToolbox

    Robust regression toolbox for neuroimaging data

    HTML 2 2

  • Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analysis of neuroimaging data and simple scripts using high-level commands tailored to neuroimaging analysis.

    Matlab 39 28 GPL-2.0 Updated Jul 17, 2018
  • Brain signature patterns, atlases of regions, and meta-analysis masks for neuroimaging data analysis.

    Matlab 7 3 GPL-3.0 Updated Jul 16, 2018
  • Single-level and multi-level mediation analyses for any kind of data, with bootstrap-based significance testing. Neuroimaging-oriented functions allow for mediation effect parametric mapping (mapping of mediation effects across the brain) and multivariate mediation.

    Matlab 11 4 Updated Jul 14, 2018
  • How-to examples and a batch pipeline for second-level neuroimaging analysis. Batch scripts and examples publish HTML files with code and output.

    Matlab 2 3 GPL-2.0 Updated Jul 13, 2018
  • Ruby GPL-3.0 Updated Jul 12, 2018
  • Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

    JavaScript 1,891 MIT Updated Jul 9, 2018
  • A compilation of useful scripts commonly used in canlab

    Jupyter Notebook 3 2 GPL-3.0 Updated Jul 4, 2018
  • Publicly available canlab experimental paradigms

    JavaScript 2 Updated Jul 4, 2018
  • Matlab Updated Jun 8, 2018
  • HTML Updated May 15, 2018
  • Containerizing the Canlab code

    3 GPL-3.0 Updated May 9, 2018
  • Coordinate-based meta-analysis for neuroimaging using Multilevel Kernel Density Analysis and various other statistical tools (chi-square, clustering, correspondence analysis, parcellation)

    Matlab 5 5 GPL-2.0 Updated Apr 30, 2018
  • All of the preprocessing code

    Matlab 2 1 GPL-2.0 Updated Mar 19, 2018
  • Wager lab fork of the Apkarian group's ABLM toolbox.

    C Updated Feb 7, 2018
  • Matlab 2 Updated Feb 6, 2018
  • Utility functions for working with DICOM and BIDS neuroimaging data

    Python 19 MIT Updated Jan 10, 2018
  • MATLAB code for identifying generalizable brain representations of pain, cognitive control, and negative emotion

    Matlab 1 GPL-3.0 Updated Jan 5, 2018
  • Matlab 1 Updated Jun 13, 2017
  • A collection of code for the r21stress project

    Matlab 1 GPL-2.0 Updated Jun 1, 2017
  • Version of SPM8 with the Canlab's internal modifications

    Matlab 1 Updated Jun 1, 2017
  • Robust regression toolbox for neuroimaging data

    HTML 2 2 GPL-2.0 Updated Apr 5, 2017
  • Public repository for shared CANlab datasets (behavioral, physio)

    2 GPL-3.0 Updated Mar 22, 2017
  • E-Basic function to integrate a Labjack USB I/O device with E-Prime 2.0

    2 MIT Updated Feb 15, 2017
  • Martin Lindquist's dynamic correlation toolboxes. Designed for fMRI analysis, useful for other applications too.

    HTML 12 9 Updated Oct 26, 2016
  • A tutorial for git and slurm

    Shell GPL-3.0 Updated Aug 30, 2016
  • A python script to generate and submit Slurm jobs

    Python 2 Updated Jul 19, 2016
  • The matlab functions that wani is working on, but not on the wagerlab repository

    Matlab 1 MIT Updated Jul 14, 2016
  • A few routines to perform "auto reorient" in SPM

    Matlab 1 GPL-2.0 Updated Nov 13, 2015