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Scientific formulae for the Homebrew package manager
Ruby
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README.md
abyss.rb
adol-c.rb
amos.rb
analysis.rb
ann.rb
armadillo.rb
arow++.rb
bact.rb
bali-phy.rb
bam-readcount.rb
bamtools.rb
bamutil.rb
beagle.rb
bedops.rb
bedtools.rb
bioawk.rb
bitseq.rb
blast.rb
blat.rb
bowtie.rb
bowtie2.rb
bwa.rb
cd-hit.rb
cddlib.rb
cgns.rb
clustal-omega.rb
clustal-w.rb
cminpack.rb
coinmp.rb
coinutils.rb
colpack.rb
cufflinks.rb
dadadodo.rb
dssp.rb
edena.rb
eigen.rb
elph.rb
emboss.rb
fann.rb
fast-statistical-alignment.rb
fastqc.rb
fasttree.rb
fastx_toolkit.rb
fermi.rb
flann.rb
galib.rb
gfan.rb
glimmer3.rb
glpk.rb
gmap-gsnap.rb
hmmer.rb
hopdm.rb
hyphy.rb
igraph.rb
infernal.rb
insighttoolkit.rb
jellyfish.rb
kalign.rb
kmergenie.rb
lammps.rb
lastz.rb
libsequence.rb
lp_solve.rb
mafft.rb
mallet.rb
mathgl.rb
mathomatic.rb
maxima.rb
mcl.rb
meme.rb
metis.rb
metis4.rb
mira.rb
mpsolve.rb
mrbayes.rb
mrfast.rb
mummer.rb
muscle.rb
nauty.rb
nco.rb
niftilib.rb
octave.rb
openblas.rb
opencv.rb
openimageio.rb
paml.rb
parmetis.rb
perf.rb
petsc.rb
phylip.rb
phyml.rb
picard-tools.rb
plink.rb
pmw.rb
populations.rb
prank.rb
primer3.rb
prodigal.rb
pymol.rb
qgis.rb
qhull.rb
quicktree.rb
r.rb
radx.rb
raxml.rb
ray.rb
rml-mmc.rb
samtools.rb
scalapack.rb
scotch.rb
seq-gen.rb
seqdb.rb
seqtk.rb
sga.rb
shogun.rb
sickle.rb
sllib.rb
snpeff.rb
soapdenovo.rb
spades.rb
spatialite-gis.rb
sratoolkit.rb
suite-sparse.rb
symphony.rb
tabix.rb
tophat.rb
transtermhp.rb
triangle.rb
trilinos.rb
trinity.rb
trnascan.rb
ucsc-genome-browser.rb
unafold.rb
vcftools.rb
velvet.rb
velvetoptimiser.rb
viennarna.rb
vips.rb
voro++.rb
vtk.rb
wcslib.rb
wxmaxima.rb
xmgredit.rb

README.md

Homebrew-science

For science.

These formulae provide software tailored to scientific endeavors. Need to store large amounts of data in a sparse matrix, solve a huge optimization problem or process the images from your space telescope? Maybe we can help!

How do I install these formulae?

Just brew tap homebrew/science and then brew install <formula>.

If the formula conflicts with one from mxcl/master or another tap, you can brew install homebrew/science/<formula>.

You can also install via URL:

brew install https://raw.github.com/Homebrew/homebrew-science/master/<formula>.rb

Docs

brew help, man brew, or the Homebrew wiki.

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