Estimates function connectivity maps from fMRI data, as described in these two papers: C. Baldassano, M.C. Iordan, D.M. Beck, L. Fei-Fei. "Voxel-Level Functional Connectivity using Spatial Regularization." Neuroimage. 2012 Jul 28;63(3):1099-1106. doi: 10.1016/j.neuroimage.2012.07.046 C. Baldassano, M.C. Iordan, D.M. Beck, L. Fei-Fei. "Discovering Voxel-Level Functional Connectivity Between Cortical Regions." Machine Learning and Interpretation in Neuroimaging Workshop, Neural Information Processing Systems (NIPS) 2012. Please cite these papers if you publish results using this function. Any comments, questions, or bug reports can be directed to Chris Baldassano <firstname.lastname@example.org> <chrisbaldassano.com> Copyright (c) 2014, Christopher Baldassano, Stanford University All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: * Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. * Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. * Neither the name of Stanford University nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission. THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL CHRISTOPHER BALDASSANO BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.