Skip to content

cbcrg/pergola

master
Switch branches/tags
Code

Latest commit

 

Git stats

Files

Permalink
Failed to load latest commit information.
Type
Name
Latest commit message
Commit time
 
 
 
 
doc
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Pergola web server

CircleCI status codecov GitHub release (latest by date)

A python library for the conversion of behavioral data into genome browser compatible formats. Once behavioral data is formatted in genomic formats it is easy to use genomic software tools for its analysis. For instance you can query your data using BEDTools or visualize your records using a genome browser (see snapshot below corresponding to a rendering of mice feeding behavior on the IGV genome browser).

For more information, instructions for installation and tutorials please visit:

Pergola documentation

You can also use our web server still under development:

Pergola web server

  • Example of a visualization using the IGV desktop app:

Mouse feeding behavior-IGV snapshot

About

A tool for the visualization and analysis of longitudinal behavioral data

Resources

License

Stars

Watchers

Forks

Packages

No packages published