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*.o
*dSYM
# Autotools cruft (NEVER check this into VCS)
Makefile
Makefile.in
aclocal.m4
.deps/
.dirstamp
autom4te.cache/
compile
config.guess
config.log
config.status
config.sub
configure
depcomp
install-sh
missing
# generated tarball
shorah*.tar.bz2
# executables
b2w
contain
diri_sampler
fil
freqEst
# samtools lib
libbam.a
# python/perl scripts are generated by Autoconf from *.{py,pl}.in
# files, replacing the shebang in the process
fas2read.pl
src/scripts/amplian.py
src/scripts/dec.py
src/scripts/mm.py
src/scripts/shorah.py
src/scripts/snv.py
# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
*$py.class
py-compile
# OS X temporary files that should never be committed
.DS_Store
*.swp
*.lock
profile