From 51d933503dfe1e8014db0d0f08705cea6c684c30 Mon Sep 17 00:00:00 2001 From: Carl Boettiger Date: Fri, 29 Mar 2013 14:28:27 -0700 Subject: [PATCH] adjusted layout, added menu sidebar #77 --- _layouts/project.html | 33 ++++++++++++++++++++++-------- projects/adaptive-dynamics.html | 23 ++++++++++----------- projects/multiple-uncertainty.html | 6 ++++-- projects/nonparametric-bayes.html | 22 ++++++++++---------- projects/open-science.html | 23 ++++++++++----------- projects/phylogenetics.html | 22 ++++++++++---------- projects/ropensci.html | 22 ++++++++++---------- projects/warning-signals.html | 24 +++++++++++----------- 8 files changed, 96 insertions(+), 79 deletions(-) diff --git a/_layouts/project.html b/_layouts/project.html index 062901ff8f..23292c963b 100644 --- a/_layouts/project.html +++ b/_layouts/project.html @@ -8,17 +8,34 @@
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{{ content }} +
diff --git a/projects/adaptive-dynamics.html b/projects/adaptive-dynamics.html index c63f195e56..f5c93bf468 100644 --- a/projects/adaptive-dynamics.html +++ b/projects/adaptive-dynamics.html @@ -1,18 +1,17 @@ --- title: adaptive-dynamics -layout: page -published: false +layout: project --- {% capture project %}adaptive-dynamics{% endcapture %}
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Abstract

This project is not currently active. I still stay loosely abrest of this literature, so the reading list is somewhat more recent.
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Collaborators

  • Joshua Weitz
    • @@ -33,16 +32,16 @@

    Funding and Support/Affiliation

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    Recent Commits

    {% octokit_commits AdaptiveDynamics%}
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    Active Issues / Next Steps

    {% octokit_issues AdaptiveDynamics%}
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    Reading

    {% mendeley_feed 529981/adaptive-dynamics, 4 %}
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    Reading
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    Publications

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    Tagged notebook entries

    {% for post in site.tags.adaptive-dynamics limit:8 %}

    {{ post.title }} {{ post.date | date_to_string }}

    {% endfor %}
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    Software

    • Simulate explicit ecological and evolutionary dynamics leading to branching: AdaptiveDynamics (R, C++)
      • diff --git a/projects/multiple-uncertainty.html b/projects/multiple-uncertainty.html index f1ec114494..a7764d43fa 100644 --- a/projects/multiple-uncertainty.html +++ b/projects/multiple-uncertainty.html @@ -1,5 +1,5 @@ --- -title: The impact of Multiple Uncertainties in Conservation Decision Theory +title: The impact of multiple uncertainty in conservation decisions layout: project --- @@ -13,7 +13,8 @@

      Abstract

      This project is an exploration into measuring and comparing the value of information in the problem of optimal control/management of a natural resource under multiple sources of uncertainty. Uncertainty about model dynamics, quality of information, and the accuracy of management implementation pose a challenge both in theory and practice of managing natural systems. Different forms of uncertainty may interact, making it impossible to study each in isolation, even in theory and simulation. While managers can often gather additional information to decease uncertainty, not all information is equally valuable. The goal of this project is to help illuminate what kinds of information are most valuable (or kinds of uncertainty are most hazardous) in a way that can be quantified directly in the context of the management optimization problem.
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    Collaborators

    • Mike Springborn
      • @@ -24,6 +25,7 @@

      Funding and Support/Affiliation

      • This project is supported through my 20% independent time during my CSTAR postdoc at UC Santa Cruz.
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    diff --git a/projects/nonparametric-bayes.html b/projects/nonparametric-bayes.html index 07e6d96c05..3812db9f81 100644 --- a/projects/nonparametric-bayes.html +++ b/projects/nonparametric-bayes.html @@ -1,18 +1,18 @@ --- title: Nonparametric Bayesian Inference for Conservation Decisions -layout: page +layout: project --- {% capture project %}nonparametric-bayes{% endcapture %}
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    Abstract

    A repository for my research in nonparametric Bayesian inference for improving ecosystem management under substantial structural uncertainty.
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    Collaborators

    • Marc Mangel
      • @@ -32,16 +32,16 @@

      Funding and Support/Affiliation

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      Recent Commits

      {% octokit_commits nonparametric-bayes%}
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      Active Issues / Next Steps

      {% octokit_issues nonparametric-bayes%}
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      Reading

      {% mendeley_feed 634301/theoretical-ecology, 4 %}
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      Reading
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      Publications

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      Tagged notebook entries

      {% for post in site.tags.nonparametric-bayes limit:8 %}

      {{ post.title }} {{ post.date | date_to_string }}

      {% endfor %}
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      Data sets

      diff --git a/projects/open-science.html b/projects/open-science.html index 0ee23e5fa5..493b385930 100644 --- a/projects/open-science.html +++ b/projects/open-science.html @@ -1,20 +1,19 @@ --- title: My experiments with open science -layout: page -published: false +layout: project --- {% capture project %}open-science{% endcapture %}
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      Abstract

      This tag unites several projects.
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      Collaborators

        • @@ -32,16 +31,16 @@

        Funding and Support/Affiliation

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        Recent Commits

        {% octokit_commits labnotebook%}
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        Active Issues / Next Steps

        {% octokit_issues labnotebook%}
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        Reading

        {% mendeley_feed 530031/future-of-science, 4 %}
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        Reading
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        Publications

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        Tagged notebook entries

        {% for post in site.tags.open-science limit:8 %}

        {{ post.title }} {{ post.date | date_to_string }}

        {% endfor %}
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        Data sets

        diff --git a/projects/phylogenetics.html b/projects/phylogenetics.html index 8dbb32dc7d..6f3bd0a4c4 100644 --- a/projects/phylogenetics.html +++ b/projects/phylogenetics.html @@ -1,19 +1,19 @@ --- title: Comparative phylogenetic methods -layout: page +layout: project --- {% capture project %}phylogenetics{% endcapture %}
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        Abstract

        Part of my dissertation research involved the detection and statistical verification of regime shifts in macroevolutionary history using phylogenetic comparative methods. The statistical work appears in the [pmc]() repository, though it is often applied in my generalization of the regime shift models to the case of a "release of constraint", which is found in the [wrightscape]() repository.
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        Collaborators

        • Peter Wainwright
          • @@ -37,16 +37,16 @@

          Funding and Support/Affiliation

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          Recent Commits

          {% octokit_commits wrightscape%}
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          Active Issues / Next Steps

          {% octokit_issues wrightscape%}
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          Reading

          {% mendeley_feed 529971/phylogenetic-methods, 4 %}
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          Reading
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          Publications

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          Tagged notebook entries

          {% for post in site.tags.phylogenetics limit:8 %}

          {{ post.title }} {{ post.date | date_to_string }}

          {% endfor %}
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          Data sets

          diff --git a/projects/ropensci.html b/projects/ropensci.html index 25f49753ad..74c1c2a065 100644 --- a/projects/ropensci.html +++ b/projects/ropensci.html @@ -1,18 +1,18 @@ --- title: The ropensci project -layout: page +layout: project --- {% capture project %}ropensci{% endcapture %}
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          Abstract

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          Collaborators