From 438b14bbe883146b8d4d303337d97098102c85b4 Mon Sep 17 00:00:00 2001 From: John May Date: Sun, 24 Mar 2013 19:53:41 +0000 Subject: [PATCH] adding git.hash tag Signed-off-by: Egon Willighagen --- src/main/org/openscience/cdk/hash/AbstractHashGenerator.java | 1 + src/main/org/openscience/cdk/hash/AtomHashGenerator.java | 1 + src/main/org/openscience/cdk/hash/BasicAtomHashGenerator.java | 1 + .../org/openscience/cdk/hash/BasicMoleculeHashGenerator.java | 1 + src/main/org/openscience/cdk/hash/EnsembleHashGenerator.java | 1 + src/main/org/openscience/cdk/hash/HashGeneratorMaker.java | 1 + src/main/org/openscience/cdk/hash/MoleculeHashGenerator.java | 1 + .../org/openscience/cdk/hash/PerturbedAtomHashGenerator.java | 1 + src/main/org/openscience/cdk/hash/Pseudorandom.java | 1 + src/main/org/openscience/cdk/hash/SeedGenerator.java | 1 + src/main/org/openscience/cdk/hash/Xorshift.java | 1 + .../openscience/cdk/hash/equivalent/AllEquivalentCyclicSet.java | 1 + .../org/openscience/cdk/hash/equivalent/EquivalentSetFinder.java | 1 + .../cdk/hash/equivalent/MinimumEquivalentCyclicSet.java | 1 + .../cdk/hash/equivalent/MinimumEquivalentCyclicSetUnion.java | 1 + src/main/org/openscience/cdk/hash/seed/AtomEncoder.java | 1 + src/main/org/openscience/cdk/hash/seed/BasicAtomEncoder.java | 1 + .../org/openscience/cdk/hash/seed/ConjugatedAtomEncoder.java | 1 + .../hash/stereo/factory/GeometricDoubleBondEncoderFactory.java | 1 + .../hash/stereo/factory/GeometricTetrahedralEncoderFactory.java | 1 + .../cdk/hash/stereo/factory/StereoEncoderFactory.java | 1 + .../cdk/hash/stereo/parity/BasicPermutationParity.java | 1 + .../cdk/hash/stereo/parity/CombinedPermutationParity.java | 1 + .../openscience/cdk/hash/stereo/parity/DoubleBond2DParity.java | 1 + .../openscience/cdk/hash/stereo/parity/DoubleBond3DParity.java | 1 + .../org/openscience/cdk/hash/stereo/parity/GeometricParity.java | 1 + .../openscience/cdk/hash/stereo/parity/PermutationParity.java | 1 + .../openscience/cdk/hash/stereo/parity/Tetrahedral2DParity.java | 1 + .../openscience/cdk/hash/stereo/parity/Tetrahedral3DParity.java | 1 + 29 files changed, 29 insertions(+) diff --git a/src/main/org/openscience/cdk/hash/AbstractHashGenerator.java b/src/main/org/openscience/cdk/hash/AbstractHashGenerator.java index 3fa7b863d85..0593b1c6698 100644 --- a/src/main/org/openscience/cdk/hash/AbstractHashGenerator.java +++ b/src/main/org/openscience/cdk/hash/AbstractHashGenerator.java @@ -37,6 +37,7 @@ * * @author John May * @cdk.module hash + * @git.hash */ @TestClass("org.openscience.cdk.hash.AbstractHashGeneratorTest") class AbstractHashGenerator { diff --git a/src/main/org/openscience/cdk/hash/AtomHashGenerator.java b/src/main/org/openscience/cdk/hash/AtomHashGenerator.java index a951ede1a8a..5106aa1d99d 100644 --- a/src/main/org/openscience/cdk/hash/AtomHashGenerator.java +++ b/src/main/org/openscience/cdk/hash/AtomHashGenerator.java @@ -31,6 +31,7 @@ * * @author John May * @cdk.module interfaces + * @git.hash */ public interface AtomHashGenerator { diff --git a/src/main/org/openscience/cdk/hash/BasicAtomHashGenerator.java b/src/main/org/openscience/cdk/hash/BasicAtomHashGenerator.java index 89bb2d2d55c..cec0cbf2038 100644 --- a/src/main/org/openscience/cdk/hash/BasicAtomHashGenerator.java +++ b/src/main/org/openscience/cdk/hash/BasicAtomHashGenerator.java @@ -67,6 +67,7 @@ * Diameter * @see Original * Publication + * @git.hash */ @TestClass("org.openscience.cdk.hash.BasicAtomHashGeneratorTest") public final class BasicAtomHashGenerator extends AbstractHashGenerator diff --git a/src/main/org/openscience/cdk/hash/BasicMoleculeHashGenerator.java b/src/main/org/openscience/cdk/hash/BasicMoleculeHashGenerator.java index 7afa0d3ed07..1b4e77c57fd 100644 --- a/src/main/org/openscience/cdk/hash/BasicMoleculeHashGenerator.java +++ b/src/main/org/openscience/cdk/hash/BasicMoleculeHashGenerator.java @@ -48,6 +48,7 @@ * @cdk.module hash * @see AtomHashGenerator * @see BasicAtomHashGenerator + * @git.hash */ @TestClass("org.openscience.cdk.hash.BasicMoleculeHashGeneratorTest") public class BasicMoleculeHashGenerator implements MoleculeHashGenerator { diff --git a/src/main/org/openscience/cdk/hash/EnsembleHashGenerator.java b/src/main/org/openscience/cdk/hash/EnsembleHashGenerator.java index be13ce583bc..0bf5f2ccf5c 100644 --- a/src/main/org/openscience/cdk/hash/EnsembleHashGenerator.java +++ b/src/main/org/openscience/cdk/hash/EnsembleHashGenerator.java @@ -33,6 +33,7 @@ * * @author John May * @cdk.module interfaces + * @git.hash */ public interface EnsembleHashGenerator { diff --git a/src/main/org/openscience/cdk/hash/HashGeneratorMaker.java b/src/main/org/openscience/cdk/hash/HashGeneratorMaker.java index e7e32e88443..303c5c045ee 100644 --- a/src/main/org/openscience/cdk/hash/HashGeneratorMaker.java +++ b/src/main/org/openscience/cdk/hash/HashGeneratorMaker.java @@ -83,6 +83,7 @@ * * @author John May * @cdk.module hash + * @git.hash */ @TestClass("org.openscience.cdk.hash.HashGeneratorMakerTest") public class HashGeneratorMaker { diff --git a/src/main/org/openscience/cdk/hash/MoleculeHashGenerator.java b/src/main/org/openscience/cdk/hash/MoleculeHashGenerator.java index 31e266b2001..43e08ad6f59 100644 --- a/src/main/org/openscience/cdk/hash/MoleculeHashGenerator.java +++ b/src/main/org/openscience/cdk/hash/MoleculeHashGenerator.java @@ -30,6 +30,7 @@ * * @author John May * @cdk.module interfaces + * @git.hash */ public interface MoleculeHashGenerator { diff --git a/src/main/org/openscience/cdk/hash/PerturbedAtomHashGenerator.java b/src/main/org/openscience/cdk/hash/PerturbedAtomHashGenerator.java index 13c01fa4b43..5bfa0f268cb 100644 --- a/src/main/org/openscience/cdk/hash/PerturbedAtomHashGenerator.java +++ b/src/main/org/openscience/cdk/hash/PerturbedAtomHashGenerator.java @@ -62,6 +62,7 @@ * @see org.openscience.cdk.hash.SeedGenerator * @see Original * Publication + * @git.hash * @see HashGeneratorMaker */ @TestClass("org.openscience.cdk.hash.PerturbedAtomHashGeneratorTest") diff --git a/src/main/org/openscience/cdk/hash/Pseudorandom.java b/src/main/org/openscience/cdk/hash/Pseudorandom.java index 4aaa7ca7515..c147a00b9ce 100644 --- a/src/main/org/openscience/cdk/hash/Pseudorandom.java +++ b/src/main/org/openscience/cdk/hash/Pseudorandom.java @@ -29,6 +29,7 @@ * * @author John May * @cdk.module interfaces + * @git.hash */ public interface Pseudorandom { diff --git a/src/main/org/openscience/cdk/hash/SeedGenerator.java b/src/main/org/openscience/cdk/hash/SeedGenerator.java index 288f2f778ad..e5a26553325 100644 --- a/src/main/org/openscience/cdk/hash/SeedGenerator.java +++ b/src/main/org/openscience/cdk/hash/SeedGenerator.java @@ -51,6 +51,7 @@ * * @author John May * @cdk.module hash + * @git.hash * @see BasicAtomHashGenerator * @see org.openscience.cdk.hash.seed.ConjugatedAtomEncoder */ diff --git a/src/main/org/openscience/cdk/hash/Xorshift.java b/src/main/org/openscience/cdk/hash/Xorshift.java index 792c071494e..b2fadd975b5 100644 --- a/src/main/org/openscience/cdk/hash/Xorshift.java +++ b/src/main/org/openscience/cdk/hash/Xorshift.java @@ -33,6 +33,7 @@ * @see Xorshift * @see Xorshift * random number generators + * @git.hash * @cdk.module hash */ @TestClass("org.openscience.cdk.hash.XorshiftTest") diff --git a/src/main/org/openscience/cdk/hash/equivalent/AllEquivalentCyclicSet.java b/src/main/org/openscience/cdk/hash/equivalent/AllEquivalentCyclicSet.java index a61fa418277..f1c0b4b0b68 100644 --- a/src/main/org/openscience/cdk/hash/equivalent/AllEquivalentCyclicSet.java +++ b/src/main/org/openscience/cdk/hash/equivalent/AllEquivalentCyclicSet.java @@ -58,6 +58,7 @@ * @see org.openscience.cdk.hash.PerturbedAtomHashGenerator * @see MinimumEquivalentCyclicSet * @see MinimumEquivalentCyclicSetUnion + * @git.hash */ @TestClass("org.openscience.cdk.hash.equivalent.AllEquivalentCyclicSetTest") public final class AllEquivalentCyclicSet implements EquivalentSetFinder { diff --git a/src/main/org/openscience/cdk/hash/equivalent/EquivalentSetFinder.java b/src/main/org/openscience/cdk/hash/equivalent/EquivalentSetFinder.java index 04d81aeb1fc..bd7c7d0b641 100644 --- a/src/main/org/openscience/cdk/hash/equivalent/EquivalentSetFinder.java +++ b/src/main/org/openscience/cdk/hash/equivalent/EquivalentSetFinder.java @@ -39,6 +39,7 @@ * * @author John May * @cdk.module hash + * @git.hash */ public interface EquivalentSetFinder { diff --git a/src/main/org/openscience/cdk/hash/equivalent/MinimumEquivalentCyclicSet.java b/src/main/org/openscience/cdk/hash/equivalent/MinimumEquivalentCyclicSet.java index d3249e2033e..fd25f913ff9 100644 --- a/src/main/org/openscience/cdk/hash/equivalent/MinimumEquivalentCyclicSet.java +++ b/src/main/org/openscience/cdk/hash/equivalent/MinimumEquivalentCyclicSet.java @@ -73,6 +73,7 @@ * @see MinimumEquivalentCyclicSetUnion * @see AllEquivalentCyclicSet * @see org.openscience.cdk.hash.HashGeneratorMaker + * @git.hash */ @TestClass("org.openscience.cdk.hash.equivalent.MinimumEquivalentCyclicSetTest") public final class MinimumEquivalentCyclicSet implements EquivalentSetFinder { diff --git a/src/main/org/openscience/cdk/hash/equivalent/MinimumEquivalentCyclicSetUnion.java b/src/main/org/openscience/cdk/hash/equivalent/MinimumEquivalentCyclicSetUnion.java index 02c3bd57bb5..a111c48ed74 100644 --- a/src/main/org/openscience/cdk/hash/equivalent/MinimumEquivalentCyclicSetUnion.java +++ b/src/main/org/openscience/cdk/hash/equivalent/MinimumEquivalentCyclicSetUnion.java @@ -78,6 +78,7 @@ * @see AllEquivalentCyclicSet * @deprecated provided for to demonstrate a relatively robust but ultimately * incomplete approach + * @git.hash */ @Deprecated @TestClass("org.openscience.cdk.hash.equivalent.MinimumEquivalentCyclicSetUnionTest") diff --git a/src/main/org/openscience/cdk/hash/seed/AtomEncoder.java b/src/main/org/openscience/cdk/hash/seed/AtomEncoder.java index f8fd4084d43..6dccb2ded96 100644 --- a/src/main/org/openscience/cdk/hash/seed/AtomEncoder.java +++ b/src/main/org/openscience/cdk/hash/seed/AtomEncoder.java @@ -34,6 +34,7 @@ * @author John May * @cdk.module interfaces * @see org.openscience.cdk.hash.AtomHashGenerator + * @git.hash */ public interface AtomEncoder { diff --git a/src/main/org/openscience/cdk/hash/seed/BasicAtomEncoder.java b/src/main/org/openscience/cdk/hash/seed/BasicAtomEncoder.java index 5edf3704a09..0cf6c32b2c3 100644 --- a/src/main/org/openscience/cdk/hash/seed/BasicAtomEncoder.java +++ b/src/main/org/openscience/cdk/hash/seed/BasicAtomEncoder.java @@ -44,6 +44,7 @@ * @see ConjugatedAtomEncoder * @see Prime numbers * archive + * @git.hash */ @TestClass("org.openscience.cdk.hash.seed.BasicAtomEncoderTest") public enum BasicAtomEncoder implements AtomEncoder { diff --git a/src/main/org/openscience/cdk/hash/seed/ConjugatedAtomEncoder.java b/src/main/org/openscience/cdk/hash/seed/ConjugatedAtomEncoder.java index d9b6d18ef3a..873ad0aa0b8 100644 --- a/src/main/org/openscience/cdk/hash/seed/ConjugatedAtomEncoder.java +++ b/src/main/org/openscience/cdk/hash/seed/ConjugatedAtomEncoder.java @@ -61,6 +61,7 @@ * * @author John May * @cdk.module hash + * @git.hash */ @TestClass("org.openscience.cdk.hash.seed.ConjugatedAtomEncoderTest") public final class ConjugatedAtomEncoder implements AtomEncoder { diff --git a/src/main/org/openscience/cdk/hash/stereo/factory/GeometricDoubleBondEncoderFactory.java b/src/main/org/openscience/cdk/hash/stereo/factory/GeometricDoubleBondEncoderFactory.java index 85bd661fbda..2f6ec6c6c4d 100644 --- a/src/main/org/openscience/cdk/hash/stereo/factory/GeometricDoubleBondEncoderFactory.java +++ b/src/main/org/openscience/cdk/hash/stereo/factory/GeometricDoubleBondEncoderFactory.java @@ -62,6 +62,7 @@ * @author John May * @cdk.module hash * @see org.openscience.cdk.hash.HashGeneratorMaker + * @git.hash */ @TestClass("org.openscience.cdk.hash.stereo.factory.GeometricDoubleBondEncoderFactoryTest") public final class GeometricDoubleBondEncoderFactory diff --git a/src/main/org/openscience/cdk/hash/stereo/factory/GeometricTetrahedralEncoderFactory.java b/src/main/org/openscience/cdk/hash/stereo/factory/GeometricTetrahedralEncoderFactory.java index d08db912b1a..95382ceb721 100644 --- a/src/main/org/openscience/cdk/hash/stereo/factory/GeometricTetrahedralEncoderFactory.java +++ b/src/main/org/openscience/cdk/hash/stereo/factory/GeometricTetrahedralEncoderFactory.java @@ -56,6 +56,7 @@ * * @author John May * @cdk.module hash + * @git.hash */ @TestClass("org.openscience.cdk.hash.stereo.factory.GeometricTetrahedralEncoderFactoryTest") public class GeometricTetrahedralEncoderFactory diff --git a/src/main/org/openscience/cdk/hash/stereo/factory/StereoEncoderFactory.java b/src/main/org/openscience/cdk/hash/stereo/factory/StereoEncoderFactory.java index f78b9100032..a62b08c2ac1 100644 --- a/src/main/org/openscience/cdk/hash/stereo/factory/StereoEncoderFactory.java +++ b/src/main/org/openscience/cdk/hash/stereo/factory/StereoEncoderFactory.java @@ -33,6 +33,7 @@ * * @author John May * @cdk.module hash + * @git.hash */ public interface StereoEncoderFactory { diff --git a/src/main/org/openscience/cdk/hash/stereo/parity/BasicPermutationParity.java b/src/main/org/openscience/cdk/hash/stereo/parity/BasicPermutationParity.java index 2095bd91221..3af066219d2 100644 --- a/src/main/org/openscience/cdk/hash/stereo/parity/BasicPermutationParity.java +++ b/src/main/org/openscience/cdk/hash/stereo/parity/BasicPermutationParity.java @@ -33,6 +33,7 @@ * * @author John May * @cdk.module hash + * @git.hash */ @TestClass("org.openscience.cdk.hash.stereo.BasicPermutationParityTest") public final class BasicPermutationParity implements PermutationParity { diff --git a/src/main/org/openscience/cdk/hash/stereo/parity/CombinedPermutationParity.java b/src/main/org/openscience/cdk/hash/stereo/parity/CombinedPermutationParity.java index 3ec7c7d2dbf..7cb380c5973 100644 --- a/src/main/org/openscience/cdk/hash/stereo/parity/CombinedPermutationParity.java +++ b/src/main/org/openscience/cdk/hash/stereo/parity/CombinedPermutationParity.java @@ -32,6 +32,7 @@ * * @author John May * @cdk.module hash + * @git.hash */ @TestClass("org.openscience.cdk.hash.stereo.parity.CombinedPermutationParityTest") public final class CombinedPermutationParity implements PermutationParity { diff --git a/src/main/org/openscience/cdk/hash/stereo/parity/DoubleBond2DParity.java b/src/main/org/openscience/cdk/hash/stereo/parity/DoubleBond2DParity.java index 1b51a3d3c3c..14388339cec 100644 --- a/src/main/org/openscience/cdk/hash/stereo/parity/DoubleBond2DParity.java +++ b/src/main/org/openscience/cdk/hash/stereo/parity/DoubleBond2DParity.java @@ -38,6 +38,7 @@ * * @author John May * @cdk.module hash + * @git.hash */ @TestClass("org.openscience.cdk.hash.stereo.parity.DoubleBond2DParityTest") public final class DoubleBond2DParity implements GeometricParity { diff --git a/src/main/org/openscience/cdk/hash/stereo/parity/DoubleBond3DParity.java b/src/main/org/openscience/cdk/hash/stereo/parity/DoubleBond3DParity.java index 1e4ffbaa300..da731dd5b2f 100644 --- a/src/main/org/openscience/cdk/hash/stereo/parity/DoubleBond3DParity.java +++ b/src/main/org/openscience/cdk/hash/stereo/parity/DoubleBond3DParity.java @@ -37,6 +37,7 @@ * * @author John May * @cdk.module hash + * @git.hash */ @TestClass("org.openscience.cdk.hash.stereo.parity.DoubleBond3DParityTest") public final class DoubleBond3DParity implements GeometricParity { diff --git a/src/main/org/openscience/cdk/hash/stereo/parity/GeometricParity.java b/src/main/org/openscience/cdk/hash/stereo/parity/GeometricParity.java index 37f277a427e..456c313a086 100644 --- a/src/main/org/openscience/cdk/hash/stereo/parity/GeometricParity.java +++ b/src/main/org/openscience/cdk/hash/stereo/parity/GeometricParity.java @@ -29,6 +29,7 @@ * * @author John May * @cdk.module hash + * @git.hash */ public interface GeometricParity { diff --git a/src/main/org/openscience/cdk/hash/stereo/parity/PermutationParity.java b/src/main/org/openscience/cdk/hash/stereo/parity/PermutationParity.java index 746af9fe249..7cbb858afe0 100644 --- a/src/main/org/openscience/cdk/hash/stereo/parity/PermutationParity.java +++ b/src/main/org/openscience/cdk/hash/stereo/parity/PermutationParity.java @@ -31,6 +31,7 @@ * @cdk.module hash * @see Parity of * a Permutation, Wikipedia + * @git.hash */ public interface PermutationParity { diff --git a/src/main/org/openscience/cdk/hash/stereo/parity/Tetrahedral2DParity.java b/src/main/org/openscience/cdk/hash/stereo/parity/Tetrahedral2DParity.java index 96490273575..c1987433bc1 100644 --- a/src/main/org/openscience/cdk/hash/stereo/parity/Tetrahedral2DParity.java +++ b/src/main/org/openscience/cdk/hash/stereo/parity/Tetrahedral2DParity.java @@ -43,6 +43,7 @@ * @cdk.module hash * @see Cieplak, * T and Wisniewski, J.L. 2001 + * @git.hash */ @TestClass("org.openscience.cdk.hash.stereo.parity.Tetrahedral2DParityTest") public final class Tetrahedral2DParity implements GeometricParity { diff --git a/src/main/org/openscience/cdk/hash/stereo/parity/Tetrahedral3DParity.java b/src/main/org/openscience/cdk/hash/stereo/parity/Tetrahedral3DParity.java index ffb2a95c555..167e8811995 100644 --- a/src/main/org/openscience/cdk/hash/stereo/parity/Tetrahedral3DParity.java +++ b/src/main/org/openscience/cdk/hash/stereo/parity/Tetrahedral3DParity.java @@ -40,6 +40,7 @@ * @cdk.module hash * @see Cieplak, * T and Wisniewski, J.L. 2001 + * @git.hash */ @TestClass("org.openscience.cdk.hash.stereo.parity.Tetrahedral3DParityTest") public final class Tetrahedral3DParity implements GeometricParity {