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PANDORA is a Matlab Toolbox for analyzing neuronal electrophysiology data and constructing databases. See the Wiki for branch information.
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README.md

THE PANDORA TOOLBOX

PANDORA is a Matlab Toolbox that:

  • Makes database management accessible from your electrophysiology project;
  • Works offline within Matlab;
  • Requires no external software;
  • Is flexible, can easily tie with existing Matlab scripts;
  • Can query database as in SQL.

If you use PANDORA, please cite this paper from your software or publications:

Günay C, Edgerton JR, Li S, Sangrey T, Prinz AA, Jaeger D (2009) Database analysis of simulated and recorded electrophysiological datasets with Pandora's toolbox. Neuroinformatics, 7(2):93-111. doi: 10.1007/s12021-009-9048-z.

You should also cite the RRID: SCR_001831

Installation:

Use the 'Download ZIP' option to download the latest version from the Github page. Select 'Set Path' option or use the addpath Matlab command to add the classes/ and functions/ subdirectories to the Matlab search path. For example:

addpath <DOWNLOAD DIRECTORY>/classes
addpath <DOWNLOAD DIRECTORY>/functions

To test the installation try help tests_db and help collectspikes, which should give you their help text.

Tutorials

Documentation:

See the PDF manual under the doc/ directory. It may be somewhat outdated, but the online help using Matlab's help command will be always up-to-date.

Other resources:

Copyright:

Copyright (c) 2007-17 Cengiz Gunay and Emory University. This work is licensed under the Academic Free License ("AFL") v. 3.0. To view a copy of this license, please look at the COPYING file distributed with this software or visit http://opensource.org/licenses/afl-3.0.txt.

Contact:

Open new issues on GitHub or contact me at this address! (cengique AT users.sf.net).

Acknowledgments:

See the CREDITS file.

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