.gitignore

# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
*$py.class

# C extensions
*.so

# Distribution / packaging
.Python
env/
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib/
lib64/
parts/
sdist/
var/
*.egg-info/
.installed.cfg
*.egg

# PyInstaller
#  Usually these files are written by a python script from a template
#  before PyInstaller builds the exe, so as to inject date/other infos into it.
*.manifest
*.spec

# Installer logs
pip-log.txt
pip-delete-this-directory.txt

# Unit test / coverage reports
*htmlcov*/
.tox/
.coverage
.coverage.*
.cache
nosetests.xml
coverage.xml
*,cover
.hypothesis/

# Translations
*.mo
*.pot

# Django stuff:
*.log

# Sphinx documentation
docs/_build/

# PyBuilder
target/

#Ipython Notebook
.ipynb_checkpoints

#Results files
results/*
# exept : 
!results/analysis-files.svg

#Data : 
# ignore everything : 
data/*
# except that's part of test/examples : 
!data/simu_01
!data/simu_ms
# and that is part of synthetic gwas : 
!data/synthetic_gwas
# and for the structured sparsity examples
!data/struct_spars

#Temporary files
*~

#old/ dir are trash-like, so ignore them (use ** wildcard to match any level of subdirectories): 
**/old/*

# ignore pdf outputed by show-dimacs.R : <simu_id>.network.dimacs.pdf
*.network.dimacs.pdf