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commit 3f129f685c27ff24505249586e29d0d5ebc1338c 2 parents 9f6d259 + a652e43
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5 boek/abstract full.out
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+\BOOKMARK [1][-]{section.0.1}{Introduction}{}% 1
+\BOOKMARK [1][-]{section.0.2}{Framework}{}% 2
+\BOOKMARK [1][-]{section.0.3}{Technology\040study}{}% 3
+\BOOKMARK [1][-]{section.0.4}{Testresults}{}% 4
+\BOOKMARK [1][-]{section.0.5}{Conclusions\040and\040future\040work}{}% 5
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96 boek/abstract/abstract full.tex
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+%
+% THESISBOEK
+%
+% Dit bestand zorgt voor algemene (layout)definities, en groepeert de
+% afzonderlijke LaTeX-files tot een geheel.
+%
+% @author Erwin Six, David De Reu, Brecht Vermeulen
+%
+
+\documentclass[11pt,a4paper,oneside,notitlepage]{book}
+\usepackage[english]{babel}
+\usepackage{algorithmic}
+\usepackage{algorithm}
+\usepackage{amsthm}
+\usepackage{hyperref}
+\usepackage{array}
+%\usepackage[nottoc]{tocbibind} % Bibliografie in ToC; zie tocbibind.dvi
+
+% marges aanpassen
+% (opmerking: moet *voor* inclusie van fancyhdr package komen)
+\setlength{\hoffset}{-1in}
+\setlength{\voffset}{-1in}
+\setlength{\topmargin}{2cm}
+\setlength{\headheight}{0.5cm}
+\setlength{\headsep}{1cm}
+\setlength{\oddsidemargin}{3.5cm}
+\setlength{\evensidemargin}{3.5cm}
+\setlength{\textwidth}{16cm}
+\setlength{\textheight}{23.3cm}
+\setlength{\footskip}{1.5cm}
+
+\usepackage{fancyhdr}
+\usepackage{graphicx}
+% \usepackage[colorlinks]{hyperref}
+% Het bibliografisch opmaak bestand.
+\bibliographystyle{unsrt}
+%\bibliographystyle{bibliodutch}
+%\bibpunct{[}{]}{,}{n}{,}{,}
+
+\newtheorem{mydef}{Definition}
+\newtheorem{foundation}{Foundation}
+
+\pagestyle{fancy}
+
+\renewcommand{\chaptermark}[1]{\markright{\MakeUppercase{#1}}}
+\renewcommand{\sectionmark}[1]{\markright{\thesection~#1}}
+
+\newcommand{\headerfmt}[1]{\textsl{\textsf{#1}}}
+\newcommand{\headerfmtpage}[1]{\textsf{#1}}
+
+\fancyhf{}
+\fancyhead[LE,RO]{\headerfmtpage{\thepage}}
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+\fancyhead[RE]{\headerfmt{\leftmark}}
+\renewcommand{\headrulewidth}{0.5pt}
+\renewcommand{\footrulewidth}{0pt}
+
+\fancypagestyle{plain}{ % eerste bladzijde van een hoofdstuk
+ \fancyhf{}
+ \fancyhead[LE,RO]{\headerfmtpage{\thepage}}
+ \fancyhead[LO]{\headerfmt{\rightmark}}
+ \fancyhead[RE]{\headerfmt{\leftmark}}
+ \renewcommand{\headrulewidth}{0.5pt}
+ \renewcommand{\footrulewidth}{0pt}
+}
+
+% anderhalve interlinie (opm: titelblad gaat uit van 1.5)
+\renewcommand{\baselinestretch}{1.5}
+
+% indien LaTeX niet goed splitst, neem je woord hierin op, of evt om splitsen
+% te voorkomen
+\hyphenation{ditmagnooitgesplitstworden dit-woord-splitst-hier}
+
+\begin{document}
+
+%!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
+%!!!!!!!!!!! onderaan/bovenaan elk blad thesistitel zetten !!!!!!!!!!!
+%!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
+
+% overzicht/samenvatting
+%\include{overzicht}
+
+\pagestyle{fancy}
+\frontmatter
+
+\setlength{\parindent}{0pt}
+\setlength{\parskip}{0.5\baselineskip plus 0.5ex minus 0.2ex}
+\setlength{\parskip}{1ex plus 0.5ex minus 0.2ex}
+
+% hoofdstukken
+\mainmatter
+
+\include{abstract/abstract}
+\bibliography{collection}
+\backmatter
+\end{document}
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54 boek/abstract/abstract.aux
@@ -1,24 +1,44 @@
\relax
+\providecommand\HyperFirstAtBeginDocument{\AtBeginDocument}
+\HyperFirstAtBeginDocument{\ifx\hyper@anchor\@undefined
+\global\let\oldcontentsline\contentsline
+\gdef\contentsline#1#2#3#4{\oldcontentsline{#1}{#2}{#3}}
+\global\let\oldnewlabel\newlabel
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+\gdef\newlabelxx#1#2#3#4#5#6{\oldnewlabel{#1}{{#2}{#3}}}
+\AtEndDocument{\ifx\hyper@anchor\@undefined
+\let\contentsline\oldcontentsline
+\let\newlabel\oldnewlabel
+\fi}
+\fi}
+\global\let\hyper@last\relax
+\gdef\HyperFirstAtBeginDocument#1{#1}
+\providecommand*\HyPL@Entry[1]{}
+\citation{dyncluster}
+\citation{gusfield}
+\HyPL@Entry{0<</S/D>>}
+\select@language{english}
+\@writefile{toc}{\select@language{english}}
+\@writefile{lof}{\select@language{english}}
+\@writefile{lot}{\select@language{english}}
+\@writefile{toc}{\contentsline {section}{\numberline {I}Introduction}{1}{section.1}}
+\@writefile{toc}{\contentsline {section}{\numberline {II}Theoretical Model}{1}{section.2}}
+\@writefile{toc}{\contentsline {section}{\numberline {III}Pipes and Filters}{1}{section.3}}
+\newlabel{pipes}{{III}{1}{Pipes and Filters\relax }{section.3}{}}
+\@writefile{lof}{\contentsline {figure}{\numberline {1}{\ignorespaces The co-author rule in action: comparing the two instance of James, a similarity ($w_m$) is added as the co-authors Yu and Yu C. match.}}{1}{figure.1}}
+\newlabel{fig:pipes}{{1}{1}{The co-author rule in action: comparing the two instance of James, a similarity ($w_m$) is added as the co-authors Yu and Yu C. match}{figure.1}{}}
+\@writefile{toc}{\contentsline {section}{\numberline {IV}Clustering}{1}{section.4}}
+\@writefile{lof}{\contentsline {figure}{\numberline {2}{\ignorespaces An overview of the different pipes and the flow running between them.}}{1}{figure.2}}
+\newlabel{fig:pipes}{{2}{1}{An overview of the different pipes and the flow running between them}{figure.2}{}}
\bibstyle{phdsymp}
\bibcite{upnp}{1}
\bibcite{cling}{2}
\bibcite{owl}{3}
\bibcite{owls}{4}
\bibcite{owlstc}{5}
-\@writefile{lof}{\contentsline {figure}{\numberline {1}{\ignorespaces Service Manager}}{1}}
-\newlabel{fig:architectuur}{{1}{1}}
-\select@language{english}
-\@writefile{toc}{\select@language{english}}
-\@writefile{lof}{\select@language{english}}
-\@writefile{lot}{\select@language{english}}
-\@writefile{toc}{\contentsline {section}{\numberline {I}Introduction}{1}}
-\@writefile{toc}{\contentsline {section}{\numberline {II}Framework}{1}}
-\@writefile{toc}{\contentsline {section}{\numberline {III}Technology study}{1}}
-\@writefile{lof}{\contentsline {figure}{\numberline {2}{\ignorespaces Top-level of robot ontology}}{1}}
-\newlabel{fig:ontology}{{2}{1}}
-\@writefile{toc}{\contentsline {section}{\numberline {IV}Testresults}{1}}
-\@writefile{lof}{\contentsline {figure}{\numberline {3}{\ignorespaces Performance test of the matchmaker on Laptop (2GHz processor, 1GB RAM) and ALIX (500MHz processor, 256MB RAM)}}{1}}
-\newlabel{fig:testperformance}{{3}{1}}
-\@writefile{lof}{\contentsline {figure}{\numberline {4}{\ignorespaces Test of influence of parameters on performance on Laptop (2GHz processor, 1GB RAM)}}{1}}
-\newlabel{fig:testparameters}{{4}{1}}
-\@writefile{toc}{\contentsline {section}{\numberline {V}Conclusions and future work}{1}}
+\@writefile{toc}{\contentsline {section}{\numberline {V}Results}{2}{section.5}}
+\@writefile{lof}{\contentsline {figure}{\numberline {3}{\ignorespaces Performance test of the matchmaker on Laptop (2GHz processor, 1GB RAM) and ALIX (500MHz processor, 256MB RAM)}}{2}{figure.3}}
+\newlabel{fig:testperformance}{{3}{2}{Performance test of the matchmaker on Laptop (2GHz processor, 1GB RAM) and ALIX (500MHz processor, 256MB RAM)\relax }{figure.3}{}}
+\@writefile{lof}{\contentsline {figure}{\numberline {4}{\ignorespaces Test of influence of parameters on performance on Laptop (2GHz processor, 1GB RAM)}}{2}{figure.4}}
+\newlabel{fig:testparameters}{{4}{2}{Test of influence of parameters on performance on Laptop (2GHz processor, 1GB RAM)\relax }{figure.4}{}}
+\@writefile{toc}{\contentsline {section}{\numberline {VI}Conclusions and future work}{2}{section.6}}
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5 boek/abstract/abstract.blg
@@ -1,9 +1,10 @@
This is BibTeX, Version 0.99dThe top-level auxiliary file: C:\Users\Simon Buelens\Workspace\thesis\boek\abstract\abstract.aux
I couldn't open style file phdsymp.bst
----line 16 of file C:\Users\Simon Buelens\Workspace\thesis\boek\abstract\abstract.aux
+---line 2 of file C:\Users\Simon Buelens\Workspace\thesis\boek\abstract\abstract.aux
: \bibstyle{phdsymp
: }
I'm skipping whatever remains of this command
+I found no \citation commands---while reading file C:\Users\Simon Buelens\Workspace\thesis\boek\abstract\abstract.aux
I found no \bibdata command---while reading file C:\Users\Simon Buelens\Workspace\thesis\boek\abstract\abstract.aux
I found no style file---while reading file C:\Users\Simon Buelens\Workspace\thesis\boek\abstract\abstract.aux
-(There were 3 error messages)
+(There were 4 error messages)
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248 boek/abstract/abstract.log
@@ -1,4 +1,4 @@
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@@ -0,0 +1,6 @@
+\BOOKMARK [1][-]{section.1}{Introduction}{}% 1
+\BOOKMARK [1][-]{section.2}{Theoretical\040Model}{}% 2
+\BOOKMARK [1][-]{section.3}{Pipes\040and\040Filters}{}% 3
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-
+\usepackage{hyperref}
\usepackage{graphicx} % Om figuren te kunnen verwerken
\usepackage{graphics} % Om figuren te verwerken.
\graphicspath{{figuren/}} % De plaats waar latex zijn figuren gaat halen.
@@ -43,38 +43,61 @@
\section{Introduction}
-Researchers loose valuable time searching for
+Researchers loose valuable time searching for research material related to their field of expertise. The process of finding and verifying experts is extensive and troublesome. The aim of this article is creating a framework that is capable of retrieving publications and related information from online sources, analyzing this information and linking it to the correct author and enabling users to search for experts for a given subject. The main focus is on the disambiguation of authors, the classification into clusters and the extensibility of the framework.
+\section{Theoretical Model}
-\section{Framework}
+The foundation of the framework is based on the five following observations:
-\begin{figure}
-\centering
-%\includegraphics[width= 0.35\textwidth]{fig/architectuur.pdf}
-\caption{Service Manager}
-\label{fig:architectuur}
-\end{figure}
+\begin{enumerate}
+ \item All instances are different authors until proven otherwise.
+ \item No decision is made permanent.
+ \item Any information is considered partial information.
+ \item A constantly changing input asks for a constantly changing output.
+ \item The stream of information is endless.
+\end{enumerate}
-%\begin{description}
-%\item[- Service Interaction Manager] Serves as a regulator for interactions with other parts of the system (AI and Context Manager) and external services.
-%\item[- Service Discovery] An interface offering classic syntax based service discovery. This component is responsible for finding semantic devices and their matching services and invoking and monitoring the semantically described services.
-%\item[- MatchMaker] A service for matching incoming semantic requests with the descriptions of the services in the local repository. This component communicates with the \textit{Context Manager} in order to take into account the current context. A simple lightweight matchmaker was implemented supporting matching based on inputs, outputs, preconditions and effects, and including the local context into the process.
-%\item[- Service Repository] This component is responsible for checking the availability of the offered services and provide a list of currently available services to the \textit{MatchMaker}. Services that are composed out of other services can rely on devices on the network for offering some subcomponent, when these are not available, the composite service will not be advertised by the \textit{Service Repository} as available.
-%\item[- Service Execution Manager] The best suitable service out of the obtained matching results, is selected by this component. The selection can be based on how well the offered services matches the semantic requests, but also on context information such as the distance to a goal location. After selecting a service, the semantic inputs are transformed according to the grounding and the service is invoked. The results of the service invocation are then translated to semantic outputs. Another task of this component is the monitoring of the progress of execution. When the execution of the service fails, the \textit{Execution Manager} is informed of this fact by the eventing mechanism and the next best service in the list will be selected for execution.
-%\end{description}
+Starting from this foundation, the article lays out the rudiments of the framework, starting with a theoretical model. This model is composed of three layers, combining the structural, informational and algorithmic aspects that emerge from dealing with the difficulties related to author disambiguation. This is achieved by a graph representation where the authors are phased in three different levels. At the highest level is the family name, below are authors that are considered unique (a cluster) containing instances of names that are linked to the publications. This allows name-matching and regrouping without losing information.
+The theoretical model also contains a summary of the different rules. They drive the entire flow of the framework by converting new information into similarities between instances. The four rules that are examined are:
-\section{Technology study}
+\begin{description}
+ \item[- Community Rule] Exploiting the fact that authors often work together with the same co-author. \autoref{fig:coauthor} gives a visual representation of how this works.
+ \item[- Interest Rule] The subjects of publications of the same author are usually located within the same field of research.
+ \item[- Email Rule] Authors with the same email address, are most likely the same person.
+ \item[- Affiliation Rule] Authors are more likely to work at one affiliation at a given time.
+\end{description}
+\begin{figure}[ht!]
+ \centering
+ \includegraphics[width= 0.35\textwidth]{fig/coauthorrulenameeq.pdf}
+ \caption{The co-author rule in action: comparing the two instance of James, a similarity ($w_m$) is added as the co-authors Yu and Yu C. match.}
+ \label{fig:pipes}
+\end{figure}
-\begin{figure}[htpb!]
-\centering
-%\includegraphics[width= 0.35\textwidth]{fig/abstract_ontologie.pdf}
-\caption{Top-level of robot ontology}
-\label{fig:ontology}
+\section{Pipes and Filters}
+\label{pipes}
+
+The core of the implementation of the framework is the simplicity achieved by pipes and filters. They allow for modifiability and extensibility as pipes processing new sources or calculating new similarities between instances can easily be added to the system. An overview of the different pipes and the flow that runs between them is shown on \autoref{fig:pipes}. The expressiveness of StatefulPipe and they scalability of AsyncConnection in combination with a shared key-value store enables out-of-the-box and carefree distribution.
+
+\begin{figure}[hb!]
+ \centering
+ \includegraphics[width= 0.35\textwidth]{fig/completepipesmall.pdf}
+ \caption{An overview of the different pipes and the flow running between them.}
+ \label{fig:pipes}
\end{figure}
-\section{Testresults}
+\section{Clustering}
+
+The article focuses a lot on the clustering process. This process is responsible for calculating what instances match to same author, based on similarities between the instances. Everytime a rule computes a new similarity, it is possible reclustering has to occur. As there is a constant influx of information, there is a need for a dynamic approach that maintains the cluster quality.
+
+The article gives an in-depth explanation of the dynamic clustering algorithm described in \cite{dyncluster}. The algorithm itself depends on the minimum cut tree algorithm. The sequential Gusfield's algorithm described in \cite{gusfield} is implemented.
+
+The article also proposes an addition to the original clustering algorithm. It introduces a new case, acting the same as case 1, but being executed instead of case 3 on the occasion that $2 * \frac{cutvalue(C_v, C_u)}{\left|V\right|} <= \alpha / 2$. This anticipates the fact that a lot of similarities with lower weights occur and they often take place in succession. Often this results in case 3 being calculated multiple times in succession, before finally merging the clusters together. By introducing this new case, the resource-intensive execution of case 3 is switched for the very quick execution of case 1.
+
+The clustering process itself is also a pipe and as noted before, in \autoref{pipes}, the shared key-value store Redis allows this process to be distributed without any trouble.
+
+\section{Results}
\begin{figure}[htpb!]
\centering
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1  boek/boek.blg
@@ -1,7 +1,6 @@
The top-level auxiliary file: boek.aux
The style file: unsrt.bst
A level-1 auxiliary file: voorwoord.aux
-A level-1 auxiliary file: titelblad/voorblad.aux
A level-1 auxiliary file: inleiding.aux
A level-1 auxiliary file: sota.aux
A level-1 auxiliary file: framework.aux
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28 boek/boek.tex
@@ -113,32 +113,30 @@
\setlength{\hoffset}{-1in}
\setlength{\voffset}{-1in}
-%% geen paginanummering tot we aan de inhoudsopgave komen
+
+
+% geen paginanummering tot we aan de inhoudsopgave komen
\pagestyle{empty}
-%
-%% voorwoord met dankwoord en toelating tot bruikleen (ondertekend)
+
+% voorwoord met dankwoord en toelating tot bruikleen (ondertekend)
\include{voorwoord}
-% overzicht
%\include{overzicht}
-\pagestyle{empty}
-
-\newpage
-\include{titelblad/voorblad}
+\pagestyle{empty}
\newpage
-%%\setlength{\hoffset}{0in}
-%%\setlength{\voffset}{0in}
-%%%\addcontentsline{toc}{chapter}{Extended abstract}
-%%\includepdf[pages=-]{abstract/abstract.pdf}
-%%\setlength{\hoffset}{-1in}
-%%\setlength{\voffset}{-1in}
+\setlength{\hoffset}{0in}
+\setlength{\voffset}{0in}
+%\addcontentsline{toc}{chapter}{Extended abstract}
+\includepdf[pages=-]{abstract/abstract.pdf}
+\setlength{\hoffset}{-1in}
+\setlength{\voffset}{-1in}
%
-%%\newpage
+\newpage
%
%
%% inhoudstafel
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2  boek/clustering full.tex
@@ -1,4 +1,4 @@
-%
+
% THESISBOEK
%
% Dit bestand zorgt voor algemene (layout)definities, en groepeert de
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2  boek/futurework.tex
@@ -4,7 +4,7 @@ \chapter{Conclusion and Future Work}
\section{Conclusion}
-In this master's thesis we examined the opportunities using the semantic web and data processing. We found out that the possibilities within expert finding and author disambiguation are challenging and can contribute in solving a real-life problem. At the end of this informative investigation, the objective became clear: creating a framework that is able to disambiguate authors and allows users to find experts for a certain subject.
+In this master's thesis we examined the opportunities using the semantic web and data processing. We found out that the possibilities within expert finding and author disambiguation are challenging and can contribute in solving a real-life problem. At the end of this informative investigation, the objective became clear: creating a framework that is able to disambiguate authors and allows users to find experts for a certain subject, while keeping it extensible for future additions.
% Wat is juist zo naief aan de eerste aanpak en waarop is deze precies gebaseerd, in 1 zin
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2  boek/results full.tex
@@ -90,7 +90,7 @@
% hoofdstukken
\mainmatter
-\include{results}
+\include{abstract/abstract}
\bibliography{collection}
\backmatter
\end{document}
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2  dblp_clusters_results.txt
@@ -1,3 +1,5 @@
+Different F measures for the 5 families
+
woo2 ::: Y_1 = 87.50000000000001, Y_.5 = 81.3953488372093, Y_weighted = 87.50000000000001
yuchen ::: Y_1 = 2.7325856449747534, Y_.5 = 6.120928995781811, Y_weighted = 8.719004851766964
mens2 ::: Y_1 = 100, Y_.5 = 100, Y_weighted = 100
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