Remove hardcoded endpoint from mount.sh

Reset changes to .gitignore, and add pytest-related dirs.
chapmanb · 1a4d8a3958d9e81ff29651e7ead742dba54ff1ff · tetianakh committed Nov 14, 2016 · Nov 14, 2016 · 1a4d8a3
1 parent 5718f94
commit 1a4d8a3958d9e81ff29651e7ead742dba54ff1ff
Unified Split

Showing with 5 additions and 3 deletions.

+4 −2 .gitignore

0 tests/data/automated/run_info-fusion.yaml

0 tests/{ → scripts}/goofys_logs.sh

+1 −1 tests/{ → scripts}/mount.sh
diff --git a/.gitignore b/.gitignore
@@ -5,6 +5,8 @@ bcbio_nextgen.egg-info/
 build/
 docs/_build
 dist/
+tests/data/test_srnaseq/
+tests/unit/bcbio-nextgen-test-data/
 tests/data/100326*
 tests/data/110106*
 tests/data/110221*
@@ -14,7 +16,6 @@ tests/data/tcga_benchmark
 tests/test_automated_output/
 tests/data/automated/*-sorted.bed
 tests/data/variants/S1_S2-combined*
-tests/data/Harvard-inDrop
 cwl/*-workflow
 .DS_Store
 .#*
@@ -23,4 +24,5 @@ cwl/*-workflow
 *~
 \#*
 .idea/
-__pycache__/
+__pycache__
+.coverage
diff --git a/tests/data/automated/run_info-fusion.yaml b/tests/data/automated/run_info-fusion.yaml
diff --git a/tests/goofys_logs.sh → tests/scripts/goofys_logs.sh b/tests/goofys_logs.sh → tests/scripts/goofys_logs.sh
diff --git a/tests/mount.sh → tests/scripts/mount.sh b/tests/mount.sh → tests/scripts/mount.sh
@@ -11,7 +11,7 @@ else
     echo "Starting syslogd..."
     service rsyslog start
 	echo "Mounting the bucket..."
-	cmd="goofys --endpoint s3.eu-central-1.amazonaws.com --sse $_BUCKET /mnt/$_BUCKET"
+	cmd="goofys --sse $_BUCKET /mnt/$_BUCKET"
 	echo $cmd
 	$cmd
     sleep 1