From 4c8b4d58552a1d08c3f51f3417db99e290651eeb Mon Sep 17 00:00:00 2001
From: Javier Herrero <javier.herrero@ucl.ac.uk>
Date: Fri, 8 Apr 2016 11:22:55 +0100
Subject: [PATCH] More changes for v1.2

---
 eforge.pl                  |  2 +-
 webserver/cgi-bin/index.pl | 12 ++++++++++++
 2 files changed, 13 insertions(+), 1 deletion(-)

diff --git a/eforge.pl b/eforge.pl
index de3c034..6a9dd51 100644
--- a/eforge.pl
+++ b/eforge.pl
@@ -183,7 +183,7 @@ =head1 ACKNOWLEDGEMENTS
 
 my $cwd = getcwd;
 
-my $dbname = "eforge_1.1.db";
+my $dbname = "eforge_1.2.db";
 
 my $bkgd; # Default value
 my $bkgd_label;
diff --git a/webserver/cgi-bin/index.pl b/webserver/cgi-bin/index.pl
index 2f32255..3d664c3 100755
--- a/webserver/cgi-bin/index.pl
+++ b/webserver/cgi-bin/index.pl
@@ -68,6 +68,7 @@
     {"Download" => "$WEB_ROOT/?download"},
     {"About" => "$WEB_ROOT/?about"},
     {"__title__" => "Previous versions"},
+    {"eFORGE v1.1" => "http://eforge.cs.ucl.ac.uk/eFORGE.v1.1"},
     {"eFORGE v1.0" => "http://eforge.cs.ucl.ac.uk/eFORGE.v1.0"},
     {"__title__" => "UCL Cancer Institute"},
     {"Home" => "http://www.ucl.ac.uk/cancer/"},
@@ -999,6 +1000,17 @@ sub print_documentation_page {
         "<strong>False Positive Rate by DMP set Count</strong><br /><img src=\"$WEB_ROOT/img/analysis-fdr.png\" width=100%><br />This plot suggests that for a DMP set of >= 20, a threshold of -log10 (binomial p value) >= 3.38 (equivalent to 0.001 in corrected p value) maintains the false positive rate below around 0.0025 (0.25%)."
     );
 
+    print Template::content_box("Versions",
+        "<strong>v1.2</strong><br \><br \>
+This version includes DHS data from the BLUEPRINT Consortium.<br />",
+
+        "<strong>v1.1</strong><br /><br />
+Version 1.1 adds both DHS and Histone marks from the Consolidated Roadmap data to eFORGE analysis. One of the options allows to run eFORGE against all five H3 marks at once. This version also includes new changes under the hood like a redeisgn of the underlying database.<br />",
+
+        "<strong>v1.0</strong><br /><br />
+First version of eFORGE. The tools allows to analyses DMPs versus Epigenome Roadmap and ENCODE DHS.<br />"
+    );
+
     print Template::end;
     exit(0);
 }