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Commits on Sep 30, 2015
  1. @jherrero

    Information and files to rebuild the DB from scratch

    jherrero committed Sep 30, 2015
    3d1bc05
  2. @jherrero

    New DB schema - both code and DB are data-agnostic

    jherrero committed Sep 30, 2015
    d61058b
  3. @jherrero

    Copyright and authorship

    jherrero committed Sep 30, 2015
    43d7112
Commits on Sep 29, 2015
  1. @jherrero

    Move SQL for fetching probe_id from location to eForge.pm

    jherrero committed Sep 29, 2015
    10a29b3
  2. @jherrero

    Fix bug about remaining variable

    jherrero committed Sep 29, 2015
    ed1b556
  3. @jherrero

    Fix legacy from FORGE in process_file and fetch_rsid (now called fetc… 

    …h_probe_id)
    jherrero committed Sep 29, 2015
    48e0d8b
  4. @jherrero

    Use a refarray instead of an array for mvps

    jherrero committed Sep 29, 2015
    a61d7ee
Commits on Jul 21, 2015

  1. added code to view background selection 

    added code to view background selection (if unhashed)
    committed Jul 21, 2015
    280de32
Commits on Jul 6, 2015
  1. @jherrero

    Update title for new v1.1 version

    jherrero committed Jul 6, 2015
    008bf69
  2. @jherrero

    Update title for new v1.1 version

    jherrero committed Jul 6, 2015
    51771ca
  3. @jherrero

    Update INSTALL instructions

    jherrero committed Jul 6, 2015
    cff5ad1
Commits on Jul 5, 2015
  1. @jherrero

    Support to deploy the webserver on any URL (like http://server.org/ef… 

    …orge/)
    jherrero committed Jul 5, 2015
    baec2d3
Commits on Jul 2, 2015
  1. @jherrero

    Update doc

    jherrero committed Jul 2, 2015
    c5b6db2
  2. @jherrero

    Mention FDR instead of Bonferroni correction in the docs

    jherrero committed Jul 2, 2015
    96fb565
Commits on Jun 28, 2015
  1. @jherrero

    Support for cells from diff tissues with the same name 

    The plot support cases where two tissues have cell type with the same name. This happens in the
Blueprint data set, for instance.
    jherrero committed Jun 28, 2015
    fe28dad
Commits on Jun 24, 2015
  1. @jherrero

    Support for new reference datasets on the webserver 

    Changes to the main interface and to the sanity check for that option.
Labels have been updated to reflect the official name for the projects from which the reference dataset have been built.
    jherrero committed Jun 24, 2015
    f8e5ecd
Commits on Jun 23, 2015
  1. @jherrero

    Several updates: 27k, eforge_1.1.db and webserver

    jherrero committed Jun 23, 2015
    302f4f2
  2. @jherrero

    Update webcode to use eforge_1.1.db 

    Also updated the copyright notice on the web page.
    jherrero committed Jun 23, 2015
    5777feb
Commits on Jun 17, 2015

  1. Delete top_probes_teschendorff_ovarian_cancer_study_top_50_probes

    committed Jun 17, 2015
    632c178

  2. changes to email and copyright (still GPL) 

    contact and added UCL copyright details (still GPL)
    committed Jun 17, 2015
    3621e77
Commits on Jun 16, 2015

  1. db changes in code 

    changes in database to add blueprint and consolidated roadmap data
    committed Jun 16, 2015
    e5465dd
Commits on May 22, 2015

  1. Change in label 

    Change in label in analysis strategy figure
    committed May 22, 2015
    a02d18b
Commits on May 7, 2015

  1. Update README

    committed May 7, 2015
    1359745

  2. Update README

    committed May 7, 2015
    9b3a97f
Commits on Mar 19, 2015
  1. @jherrero

    Update INSTALL

    jherrero committed Mar 19, 2015
    b9111dc
Commits on Mar 17, 2015
  1. @jherrero

    Use charlesbreeze repo instead of jherrero

    jherrero committed Mar 17, 2015
    ac45258
  2. @jherrero

    Update instructions for web install 

    Prefer to use a VirtualHost now.
    jherrero committed Mar 17, 2015
    afd6c9f
Commits on Mar 12, 2015
  1. @jherrero

    Increase fonts and contrast for readability

    jherrero committed Mar 12, 2015
    d95aa22
  2. @jherrero

    Increase fonts, parametrise dPlot size, reorder objects

    jherrero committed Mar 12, 2015
    0975fae
  3. @jherrero

    Add --autoopen options

    jherrero committed Mar 12, 2015
    4ba9bb4
  4. @jherrero

    Clean up code + Fix Bonferroni-by-tissue correction

    jherrero committed Mar 12, 2015
    1a13e9f
  5. @jherrero

    Adds title to the dPlot and change font to Arial

    jherrero committed Mar 12, 2015
    fc484b5
  6. @jherrero

    Keep p-value in natural scale and represent the -log10 in ePlot

    jherrero committed Mar 12, 2015
    0c5fbc9
  7. @jherrero

    Avoid using sed which behaves differently in Mac vs Linux

    jherrero committed Mar 12, 2015
    e68655b
  8. @jherrero

    New vertical lines + labels in dPlot

    jherrero committed Mar 12, 2015
    c2816df