Update to version 1.2.4

DESCRIPTION

@@ -1,31 +1,21 @@
 Package: BTR
 Type: Package
-Title: Tools For Training and Analysing Asynchronous Boolean Models
-Version: 1.2.2
-Date: 2015-10-22
+Title: Training and Analysing Asynchronous Boolean Models
+Version: 1.2.4
+Date: 2016-9-13
 Author: Chee Yee Lim
 Maintainer: Chee Yee Lim <cyl49@cam.ac.uk>
-Description: This package contains tools for inferring asynchronous Boolean
+Description: Tools for inferring asynchronous Boolean
     models from single-cell expression data.
-Depends:
-    R (>= 3.0.3),
-    methods
-Imports:
-    parallel,
-    Rcpp (>= 0.11.4),
-    foreach (>= 1.4.1),
-    doParallel (>= 1.0.8),
-    poweRlaw (>= 0.30.0),
-    diptest (>= 0.75-7),
-    igraph (>= 1.0.1),
-    infotheo (>= 1.2.0),
-    entropy (>= 1.2.1)
+Depends: R (>= 3.0.3), methods
+Imports: parallel, Rcpp (>= 0.11.4), foreach (>= 1.4.1), doParallel (>=
+        1.0.8), poweRlaw (>= 0.30.0), diptest (>= 0.75-7), igraph (>=
+        1.0.1), infotheo (>= 1.2.0), entropy (>= 1.2.1)
 LinkingTo: Rcpp
 License: GPL-3
 LazyData: true
-Suggests:
-    bnlearn (>= 3.8.1),
-    knitr,
-    rmarkdown
-VignetteBuilder: knitr
+Suggests: bnlearn (>= 3.8.1), knitr, rmarkdown
+VignetteBuilder: knitr, rmarkdown
 RoxygenNote: 5.0.1
+NeedsCompilation: yes
+Packaged: 2016-09-17 10:17:03 UTC; cylim

NAMESPACE

@@ -36,4 +36,12 @@ import(methods)
 import(parallel)
 importFrom(Rcpp,evalCpp)
 importFrom(Rcpp,sourceCpp)
+importFrom(grDevices,rgb)
+importFrom(stats,aggregate)
+importFrom(stats,kmeans)
+importFrom(stats,median)
+importFrom(stats,rbinom)
+importFrom(stats,runif)
+importFrom(utils,combn)
+importFrom(utils,write.csv)
 useDynLib(BTR)

R/RcppExports.R

@@ -1,4 +1,4 @@
-# This file was generated by Rcpp::compileAttributes
+# Generated by using Rcpp::compileAttributes() -> do not edit by hand
 # Generator token: 10BE3573-1514-4C36-9D1C-5A225CD40393
 
 #' @title Calculating validation scores between two adjacency matrices

R/btr.R

@@ -1,19 +1,24 @@
-#' @title BTR: A package for studying asynchronous Boolean models
-#' 
-#' @description
-#' This package contains tools for Boolean model manipulation, as well as the search for the best Boolean model.
-#' 
-#' @docType package
-#' @name BTR
-NULL
-
-## All the Roxygen codes below are for generating the correct NAMESPACE file.
-#' @import methods
-#' @import parallel
-#' @import foreach
-#' @import doParallel
-NULL
-
-#' @useDynLib BTR
-#' @importFrom Rcpp sourceCpp evalCpp
+#' @title BTR: A package for studying asynchronous Boolean models
+#' 
+#' @description
+#' This package contains tools for Boolean model manipulation, as well as the search for the best Boolean model.
+#' 
+#' @docType package
+#' @name BTR
+NULL
+
+## All the Roxygen codes below are for generating the correct NAMESPACE file.
+#' @import methods
+#' @import parallel
+#' @import foreach
+#' @import doParallel
+NULL
+
+#' @useDynLib BTR
+#' @importFrom Rcpp sourceCpp evalCpp
+NULL
+
+#' @importFrom grDevices rgb
+#' @importFrom stats aggregate kmeans median rbinom runif
+#' @importFrom utils combn write.csv
 NULL