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Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.

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chenziyi/ImmuCC

 
 

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Description for each files.

1.ImmuCellDB

The scripts used to preprocess the microarray data.


2.tissue_immucc

Tissue specific signature matrix developed for tissue_ImmuCC.

3.webserver

The scripts use to preprocess RNA-Seq data and the signature matrix usedd in seq_ImmuCC model.

4.Microarray_Deconvolution.R

The scripts used for array_ImmuCC.

5.flow_cytometry.csv

The flow cytometry data used in array_ImmuCC and seq_ImmuCC.

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Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.

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  • R 76.8%
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